interventionalDBN: Interventional Inference for Dynamic Bayesian Networks
Version 1.2.2

This package allows a dynamic Bayesian network to be inferred from microarray timecourse data with interventions (inhibitors).

AuthorSimon Spencer
Date of publication2014-05-30 16:19:24
MaintainerSimon Spencer <s.e.f.spencer@warwick.ac.uk>
LicenseGPL (>= 2)
Version1.2.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("interventionalDBN")

Getting started

Package overview

Popular man pages

interventionalDBN-package: Interventional Inference for Dynamic Bayesian Networks
interventionalInference: Dynamic Bayesian Network inference with interventions.
linesROC: Add an ROC curve to an existing plot.
nxt: Produces the next set of parents from an existing set of...
plotMaxML: Plot the performance of maximum marginal likelihood...
trueMatrix: The true edge matrix used to generate 'interventionalData'.
warshall: Find the largest edge probability threshold that connects a...
See all...

All man pages Function index File listing

Man pages

countGraphs: Count the number of possible parents
formatData: Format a microarray spreadsheet ready for interventional...
interventionalData: Simulated micro-array timecourse data speadsheet.
interventionalDBN-package: Interventional Inference for Dynamic Bayesian Networks
interventionalInference: Dynamic Bayesian Network inference with interventions.
interventionalInferenceAdvanced: Dynamic Bayesian Network inference with interventions.
interventionEffects: Calculate interventional effects
linesROC: Add an ROC curve to an existing plot.
nxt: Produces the next set of parents from an existing set of...
plotMaxML: Plot the performance of maximum marginal likelihood...
trueMatrix: The true edge matrix used to generate 'interventionalData'.
warshall: Find the largest edge probability threshold that connects a...

Functions

countGraphs Man page Source code
formatData Man page Source code
interventionEffects Man page Source code
interventionalDBN Man page
interventionalDBN-package Man page
interventionalData Man page
interventionalInference Man page Source code
interventionalInferenceAdvanced Man page Source code
linesROC Man page Source code
nxt Man page Source code
plotMaxML Man page Source code
trueMatrix Man page
warshall Man page Source code

Files

NAMESPACE
data
data/trueMatrix.rda
data/interventionalData.rda
R
R/interventionEffects.R
R/countGraphs.R
R/nxt.R
R/interventionalInference.R
R/warshall.R
R/formatData.R
R/interventionalInferenceAdvanced.R
R/linesROC.R
R/plotMaxML.R
MD5
DESCRIPTION
man
man/trueMatrix.Rd
man/interventionalDBN-package.Rd
man/plotMaxML.Rd
man/warshall.Rd
man/interventionEffects.Rd
man/formatData.Rd
man/countGraphs.Rd
man/interventionalData.Rd
man/linesROC.Rd
man/interventionalInference.Rd
man/interventionalInferenceAdvanced.Rd
man/nxt.Rd
interventionalDBN documentation built on May 20, 2017, 5:56 a.m.