This package allows a dynamic Bayesian network to be inferred from microarray timecourse data with interventions (inhibitors).

Author | Simon Spencer |

Date of publication | 2014-05-30 16:19:24 |

Maintainer | Simon Spencer <s.e.f.spencer@warwick.ac.uk> |

License | GPL (>= 2) |

Version | 1.2.2 |

**countGraphs:** Count the number of possible parents

**formatData:** Format a microarray spreadsheet ready for interventional...

**interventionalData:** Simulated micro-array timecourse data speadsheet.

**interventionalDBN-package:** Interventional Inference for Dynamic Bayesian Networks

**interventionalInference:** Dynamic Bayesian Network inference with interventions.

**interventionalInferenceAdvanced:** Dynamic Bayesian Network inference with interventions.

**interventionEffects:** Calculate interventional effects

**linesROC:** Add an ROC curve to an existing plot.

**nxt:** Produces the next set of parents from an existing set of...

**plotMaxML:** Plot the performance of maximum marginal likelihood...

**trueMatrix:** The true edge matrix used to generate 'interventionalData'.

**warshall:** Find the largest edge probability threshold that connects a...

interventionalDBN

interventionalDBN/NAMESPACE

interventionalDBN/data

interventionalDBN/data/trueMatrix.rda

interventionalDBN/data/interventionalData.rda

interventionalDBN/R

interventionalDBN/R/interventionEffects.R
interventionalDBN/R/countGraphs.R
interventionalDBN/R/nxt.R
interventionalDBN/R/interventionalInference.R
interventionalDBN/R/warshall.R
interventionalDBN/R/formatData.R
interventionalDBN/R/interventionalInferenceAdvanced.R
interventionalDBN/R/linesROC.R
interventionalDBN/R/plotMaxML.R
interventionalDBN/MD5

interventionalDBN/DESCRIPTION

interventionalDBN/man

interventionalDBN/man/trueMatrix.Rd
interventionalDBN/man/interventionalDBN-package.Rd
interventionalDBN/man/plotMaxML.Rd
interventionalDBN/man/warshall.Rd
interventionalDBN/man/interventionEffects.Rd
interventionalDBN/man/formatData.Rd
interventionalDBN/man/countGraphs.Rd
interventionalDBN/man/interventionalData.Rd
interventionalDBN/man/linesROC.Rd
interventionalDBN/man/interventionalInference.Rd
interventionalDBN/man/interventionalInferenceAdvanced.Rd
interventionalDBN/man/nxt.Rd
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