inst/doc/iraceplot_package.R

In iraceplot: Plots for Visualizing the Data Produced by the 'irace' Package

## ----echo=FALSE, prompt=FALSE, message=FALSE, warning=FALSE-------------------

library(iraceplot, quietly = TRUE)
library(plotly)
iraceResults <- read_logfile(system.file(package="iraceplot", "exdata", "guide-example.Rdata", mustWork = TRUE))

## ----fig.align="center", fig.width= 7, message=FALSE, prompt=FALSE, eval=FALSE----
# parallel_coord(iraceResults)

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# all_elite <- iraceResults$allConfigurations[unlist(iraceResults$allElites),]
# plot_configurations(all_elite, iraceResults$scenario$parameters)

## ----fig.align="center", fig.width= 7, fig.height=6, message=FALSE, prompt=FALSE, eval=FALSE----
# parallel_cat(irace_results = iraceResults,
#              param_names=c("algorithm", "localsearch", "dlb", "nnls"))

## ----fig.align="center", fig.width= 7, message=FALSE, prompt=FALSE, eval=FALSE----
# sampling_pie(irace_results = iraceResults, param_names=c("algorithm", "localsearch", "alpha", "beta", "rho"))

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#  sampling_frequency(iraceResults, param_names = c("beta"))

## ----fig.align="center", fig.width= 7, fig.height=7, message=FALSE, prompt=FALSE, eval=FALSE----
#  sampling_frequency(iraceResults$allConfigurations, iraceResults$scenario$parameters, param_names = c("alpha"))

## ----fig.align="center", fig.width= 7, fig.height=6, eval=FALSE---------------
# sampling_frequency_iteration(iraceResults, param_name = "beta")

## ----fig.align="center", fig.width= 7, fig.height=6, eval=FALSE---------------
# sampling_heatmap(iraceResults, param_names = c("beta","alpha"))

## ----fig.align="center", fig.width= 7, fig.height=6, eval=FALSE---------------
# sampling_heatmap2(iraceResults$allConfigurations, iraceResults$scenario$parameters,
#                   param_names = c("localsearch","nnls"), sizes=c(0,5))

## ----fig.align="center", fig.width= 7, eval=FALSE-----------------------------
# sampling_distance(iraceResults, t=0.05)

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# boxplot_test(iraceResults, type="best")

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# scatter_test(iraceResults, x_id = 808, y_id = 809, interactive=TRUE)

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# boxplot_training(iraceResults)

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# scatter_training(iraceResults, x_id = 808, y_id = 809, interactive=TRUE)

## ----fig.align="center", fig.width=7, eval=FALSE------------------------------
# boxplot_performance(iraceResults$experiments, allElites=list(c(803,808), c(809,800)), first_is_best = TRUE)

## ----fig.align="center", fig.width=7, eval=FALSE------------------------------
# scatter_performance(iraceResults$experiments, x_id = 83, y_id = 809, interactive=TRUE)

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# plot_experiments_matrix(iraceResults, interactive = TRUE)

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# plot_model(iraceResults, param_name="algorithm")

## ----fig.align="center", fig.width=7, fig.height=6, message=FALSE, prompt=FALSE, results='hide', eval=FALSE----
# plot_model(iraceResults, param_name="alpha")

## ----fig.align="center", eval=FALSE-------------------------------------------
# report(iraceResults, filename="report")