center_mod: Center variables in fitted regression models

Description Usage Arguments Details Value Author(s) References See Also Examples

Description

center_mod (previously known as center_lm) takes fitted regression models and mean-centers the continuous variables in the model to aid interpretation, especially in the case of models with interactions. It is a wrapper to scale_mod.

Usage

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center_mod(model, binary.inputs = "0/1", center.response = FALSE,
  data = NULL,
  apply.weighted.contrasts = getOption("jtools-weighted.contrasts",
  FALSE))

Arguments

model

A regression model of type lm, glm, or svyglm; others may work as well but have not been tested.

binary.inputs

Options for binary variables. Default is 0/1; 0/1 keeps original scale; -0.5,0.5 rescales 0 as -0.5 and 1 as 0.5; center subtracts the mean; and full treats them like other continuous variables.

center.response

Should the response variable also be centered? Default is FALSE.

data

If you provide the data used to fit the model here, that data frame is used to re-fit the model instead of the stats::model.frame() of the model. This is particularly useful if you have variable transformations or polynomial terms specified in the formula.

apply.weighted.contrasts

Factor variables cannot be scaled, but you can set the contrasts such that the intercept in a regression model will reflect the true mean (assuming all other variables are centered). If set to TRUE, the argument will apply weighted effects coding to all factors. This is similar to the R default effects coding, but weights according to how many observations are at each level. An adapted version of wec::contr.wec() from the wec package is used to do this. See that package's documentation and/or Grotenhuis et al. (2016) for more info.

Details

This function will mean-center all continuous variables in a regression model for ease of interpretation, especially for those models that have interaction terms. The mean for svyglm objects is calculated using svymean, so reflects the survey-weighted mean. The weight variables in svyglm are not centered, nor are they in other lm family models.

This function re-estimates the model, so for large models one should expect a runtime equal to the first run.

Value

The functions returns a lm or glm object, inheriting from whichever class was supplied.

Author(s)

Jacob Long <[email protected]>

References

Bauer, D. J., & Curran, P. J. (2005). Probing interactions in fixed and multilevel regression: Inferential and graphical techniques. Multivariate Behavioral Research, 40(3), 373-400.

Cohen, J., Cohen, P., West, S. G., & Aiken, L. S. (2003). Applied multiple regression/correlation analyses for the behavioral sciences (3rd ed.). Mahwah, NJ: Lawrence Erlbaum Associates, Inc.

See Also

sim_slopes performs a simple slopes analysis.

interact_plot creates attractive, user-configurable plots of interaction models.

Other standardization, scaling, and centering tools: center, gscale, scale_mod, standardize

Examples

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fit <- lm(formula = Murder ~ Income * Illiteracy,
          data = as.data.frame(state.x77))
fit_center <- center_mod(fit)

# With weights
fitw <- lm(formula = Murder ~ Income * Illiteracy,
           data = as.data.frame(state.x77),
           weights = Population)
fitw_center <- center_mod(fitw)

# With svyglm
if (requireNamespace("survey")) {
library(survey)
data(api)
dstrat <- svydesign(id = ~1, strata = ~stype, weights = ~pw,
                    data = apistrat, fpc =~ fpc)
regmodel <- svyglm(api00 ~ ell * meals, design = dstrat)
regmodel_center <- center_mod(regmodel)
}

jtools documentation built on May 2, 2019, 11:06 a.m.