Man pages for kdetrees
Nonparametric method for identifying discordant phylogenetic trees
| apicomplexa | Apicomplexa gene trees sample data set. |
| as.data.frame.kdetrees | Convert kdetrees object to data.frame |
| as.matrix.multiPhylo | dissimilarity map tree vectorization |
| bw.nn | nearest-neighbor adaptive bandwidth selection |
| dist.diss | Compute pairwise tree distances |
| estimate | estimate densities from kernel matrix |
| hist.kdetrees | Create a histogram of tree density estimates |
| kdetrees | Identify discordant trees in a sample |
| kdetrees.complete | Complete kdetrees analysis convenience function |
| kdetrees-package | kdetrees |
| normkern | Generalized Gaussian kernel |
| plot.kdetrees | Plot the unnormalized density estimates for each tree. |
| print.kdetrees | Summarize a kdetrees object in human-readable form. |
