kmer: Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Version 1.1.0

Contains tools for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning. See Vinga and Almeida (2003) for a review of k-mer counting methods and applications for biological sequence analysis.

Package details

AuthorShaun Wilkinson [aut, cre]
Date of publication2018-07-04 12:00:11 UTC
MaintainerShaun Wilkinson <[email protected]>
LicenseGPL-3
Version1.1.0
URL http://github.com/shaunpwilkinson/kmer
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("kmer")

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kmer documentation built on July 5, 2018, 1:01 a.m.