LC: Lakhesis Calculator

In lakhesis: Consensus Seriation for Binary Data

Lakhesis Calculator

Description

Launch Lakhesis Calculator, a graphical interface to explore binary matrices via correspondence analysis, select potentially well-seriated sequences, and perform consensus seriation. Interface is made with ggplot2, shiny, shinydashboard, and bslib \insertCitewickham_ggplot2:_2016,chang_shiny_2024,chang_shinydashboard_2021,sievert_bslib_2024lakhesis.

Usage

LC()

Details

Input is done in the calculator, via a "long" format a two-column .csv file giving pairs of row and column incidences. See im_read_csv for details. Conversion of a pre-existing incidence matrix to long format can be performed with im_long.

Results can be downloaded from the calculator as an .rds file containing a list of the following:

• consensus The consensus seriations, diagnostic coefficients of agreement and optimality criterion, and seriated incidence matrix. (lakhesize).

• strands The strands selected by the investigator.

Value

Opens the Lakhesis Calculator.

References

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lakhesis documentation built on April 25, 2026, 5:06 p.m.