largeVis: High-Quality Visualizations of Large, High-Dimensional Datasets

Implements the largeVis algorithm (see Tang, et al. (2016) <https://arxiv.org/abs/1602.00370>) for visualizing very large high-dimensional datasets. Also very fast search for approximate nearest neighbors; outlier detection; and optimized implementations of the HDBSCAN*, DBSCAN and OPTICS clustering algorithms; plotting functions for visualizing the above.

AuthorAmos B. Elberg
Date of publication2016-11-27 02:28:57
MaintainerAmos Elberg <amos.elberg@gmail.com>
LicenseGPL-3
Version0.1.10.2
https://github.com/elbamos/largeVis

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Files in this package

largeVis
largeVis/inst
largeVis/inst/vignettedata
largeVis/inst/vignettedata/vignettedata.Rda
largeVis/inst/vignettedata/momentumplot.png
largeVis/inst/vignettedata/spiral.Rda
largeVis/inst/vignettedata/degreeplot.png
largeVis/inst/extdata
largeVis/inst/extdata/benchmark.Rda
largeVis/inst/doc
largeVis/inst/doc/largeVis.Rmd
largeVis/inst/doc/momentumandusedata.R
largeVis/inst/doc/largeVis.html
largeVis/inst/doc/momentumandusedata.html
largeVis/inst/doc/momentumandusedata.Rmd
largeVis/inst/doc/largeVis.R
largeVis/inst/testdata
largeVis/inst/testdata/badedges.Rda
largeVis/inst/testdata/irisdbscan.Rda
largeVis/inst/testdata/truelof10.Rda
largeVis/inst/testdata/opttest.Rda
largeVis/inst/testdata/truelof20.Rda
largeVis/inst/testdata/glassEdges.Rda
largeVis/inst/testdata/badmat.Rda
largeVis/inst/testdata/wijstuff.Rda
largeVis/inst/testdata/irisoptics.Rda
largeVis/inst/testdata/spiral.Rda
largeVis/inst/testdata/zerotest.rda
largeVis/inst/testdata/dim512.Rda
largeVis/tests
largeVis/tests/testthat.R
largeVis/tests/testthat
largeVis/tests/testthat/test-cpp.R
largeVis/tests/testthat/test_g_dbandoptics.R
largeVis/tests/testthat/test_h_hdbscan.R
largeVis/tests/testthat/test_f_specific.R
largeVis/tests/testthat/test_c_sparse.R
largeVis/tests/testthat/test_a_distance.R
largeVis/tests/testthat/test_d_edgematrixwij.R
largeVis/tests/testthat/test_e_vis.R
largeVis/tests/testthat/test_b_neighbors.R
largeVis/src
largeVis/src/Makevars
largeVis/src/neighbors.cpp
largeVis/src/pq.h
largeVis/src/test-runner.cpp
largeVis/src/hdbscan.cpp
largeVis/src/checkfunctions.cpp
largeVis/src/sparse.cpp
largeVis/src/denseneighbors.cpp
largeVis/src/neighbors.h
largeVis/src/testcfunctions.cpp
largeVis/src/distance.h
largeVis/src/gradients.cpp
largeVis/src/distance.cpp
largeVis/src/minindexedpq.h
largeVis/src/edgeweights.cpp
largeVis/src/gradients.h
largeVis/src/minpq.h
largeVis/src/alias.h
largeVis/src/dbscan.cpp
largeVis/src/optics.cpp
largeVis/src/RcppExports.cpp
largeVis/src/largeVis.h
largeVis/src/largeVis.cpp
largeVis/NAMESPACE
largeVis/NEWS.md
largeVis/R
largeVis/R/dbscan.R largeVis/R/projectKNNs.R largeVis/R/hdbscan.R largeVis/R/buildEdgeMatrix.R
largeVis/R/largeVis-package.r
largeVis/R/RcppExports.R largeVis/R/projectionTreeSearch.R largeVis/R/dendrogram.R largeVis/R/largeVis.R largeVis/R/visualize.R largeVis/R/zzz.R largeVis/R/optics.R largeVis/R/distance.R
largeVis/vignettes
largeVis/vignettes/largevisvignettes.bib
largeVis/vignettes/largeVis.Rmd
largeVis/vignettes/momentumandusedata.Rmd
largeVis/MD5
largeVis/build
largeVis/build/vignette.rds
largeVis/DESCRIPTION
largeVis/man
largeVis/man/as_dendrogram_hdbscan.Rd largeVis/man/lof.Rd largeVis/man/sgdBatches.Rd largeVis/man/gplot.Rd largeVis/man/largeVis-package.Rd largeVis/man/lv_optics.Rd largeVis/man/distance.Rd largeVis/man/manifoldMap.Rd largeVis/man/ggManifoldMap.Rd largeVis/man/neighborsToVectors.Rd largeVis/man/randomProjectionTreeSearch.Rd largeVis/man/buildEdgeMatrix.Rd largeVis/man/buildWijMatrix.Rd largeVis/man/lv_dbscan.Rd largeVis/man/manifoldMapStretch.Rd largeVis/man/largeVis.Rd largeVis/man/hdbscan.Rd largeVis/man/projectKNNs.Rd

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