lcmm: Extended Mixed Models Using Latent Classes and Latent Processes

Estimation of various extensions of the mixed models including latent class mixed models, joint latent latent class mixed models and mixed models for curvilinear univariate or multivariate longitudinal outcomes using a maximum likelihood estimation method.

AuthorCecile Proust-Lima, Viviane Philipps, Amadou Diakite and Benoit Liquet
Date of publication2016-12-13 15:33:48
MaintainerCecile Proust-Lima <cecile.proust-lima@inserm.fr>
LicenseGPL (>= 2.0)
Version1.7.6

View on CRAN

Man pages

cuminc: Predicted cumulative incidence of event according to a...

data_hlme: Simulated dataset for hlme function

data_lcmm: Simulated dataset for lcmm and Jointlcmm functions

Diffepoce: Difference of expected prognostic cross-entropy (EPOCE)...

dynpred: Individual dynamic predictions from a joint latent class...

epoce: Estimators of the Expected Prognostic Observed Cross-Entropy...

estimates: Maximum likelihood estimates

fitY: Marginal predictions of the longitudinal outcome(s) in their...

ForInternalUse: For internal use only ...

gridsearch: Automatic grid search

hlme: Estimation of latent class linear mixed models

Jointlcmm: Estimation of joint latent class models for longitudinal and...

lcmm: Estimation of mixed-effect models and latent class...

lcmm-package: Estimation of extended mixed models using latent classes and...

multlcmm: Estimation of mutlivariate mixed-effect models and...

paquid: Longitudinal data on cognitive and physical aging in the...

plot.cuminc: Plot of predicted cumulative incidences according to a...

plot.dynpred: Plot of individual dynamic predictions

plot.lcmm: Plot of a fitted model

plot.pred.accuracy: Plots

plot.predict: Plot of predicted trajectories and link functions

postprob: Posterior classification stemmed from a 'hlme', 'lcmm',...

predictL: Class-specific marginal predictions in the latent process...

predictlink: Confidence intervals for the estimated link functions from...

predictY: Marginal predictions (possibly class-specific) of a 'hlme',...

print.lcmm: Brief summary of a 'hlme', 'lcmm', 'Jointlcmm','multlcmm',...

standardMethods: Standard methods for estimated models

summary.lcmm: Summary of a 'hlme', 'lcmm', 'Jointlcmm', 'multlcmm', 'epoce'...

summarytable: Summary of models

VarCov: Variance-covariance of the estimates

VarCovRE: Estimates, standard errors and Wald test for the parameters...

VarExpl: Percentage of variance explained by the (latent class) linear...

WaldMult: Multivariate Wald Test

Files in this package

lcmm
lcmm/inst
lcmm/inst/CITATION
lcmm/src
lcmm/src/Makevars
lcmm/src/hetmixContMult.f90
lcmm/src/hetmixlin.f90
lcmm/src/AOptim.f90
lcmm/src/calculusTransfo.f90
lcmm/src/postprob2.f90
lcmm/src/Jointhet.f90
lcmm/src/hetmixOrd.f90
lcmm/src/hetmixCont.f90
lcmm/src/cvpl.f90
lcmm/src/predictMult.f90
lcmm/src/predictCont.f90
lcmm/NAMESPACE
lcmm/NEWS
lcmm/data
lcmm/data/paquid.rda
lcmm/data/data_lcmm.rda
lcmm/data/data_hlme.rda
lcmm/R
lcmm/R/risqcum_spl.R lcmm/R/lcmm.R lcmm/R/predictY.hlme.R lcmm/R/mixture.R lcmm/R/plotresid.R lcmm/R/gridsearch.R lcmm/R/plotbaselinerisk.R lcmm/R/postprob.multlcmm.R lcmm/R/summary.Jointlcmm.R lcmm/R/hlme.R lcmm/R/VarCovRE.lcmm.R lcmm/R/summary.multlcmm.R lcmm/R/plot.predictY.R lcmm/R/VarCov.hlme.R lcmm/R/multlcmm.R lcmm/R/VarCov.Jointlcmm.R lcmm/R/fitY.Jointlcmm.R lcmm/R/summary.epoce.R lcmm/R/print.lcmm.R lcmm/R/standardMethods.R lcmm/R/plotfit.R lcmm/R/plot.R lcmm/R/predictY.multlcmm.R lcmm/R/predictY.lcmm.R lcmm/R/dynpred.R lcmm/R/plot.predictlink.R lcmm/R/Contlcmm.R lcmm/R/plot.epoce.R lcmm/R/plot.dynpred.R lcmm/R/predictY.Jointlcmm.R lcmm/R/print.Diffepoce.R lcmm/R/plotlinkfunction.R lcmm/R/estimates.Jointlcmm.R lcmm/R/print.hlme.R lcmm/R/plot.Diffepoce.R lcmm/R/print.epoce.R lcmm/R/estimates.hlme.R lcmm/R/summary.hlme.R lcmm/R/predictL.lcmm.R lcmm/R/estimates.multlcmm.R lcmm/R/predictlink.lcmm.R lcmm/R/plotsurvival.R lcmm/R/fitY.multlcmm.R lcmm/R/postprob.Jointlcmm.R lcmm/R/WaldMult.R lcmm/R/print.multlcmm.R lcmm/R/risq_spl.R lcmm/R/Jointlcmm.R lcmm/R/print.Jointlcmm.R lcmm/R/plotpostprob.R lcmm/R/VarCov.multlcmm.R lcmm/R/fitY.lcmm.R lcmm/R/VarExpl.multlcmm.R lcmm/R/predictlink.Jointlcmm.R lcmm/R/summarytable.R lcmm/R/factor.names.R lcmm/R/estimates.lcmm.R lcmm/R/postprob.lcmm.R lcmm/R/epoce.R lcmm/R/summary.Diffepoce.R lcmm/R/plot.cuminc.R lcmm/R/predictlink.multlcmm.R lcmm/R/VarCovRE.multlcmm.R lcmm/R/VarExpl.hlme.R lcmm/R/VarExpl.Jointlcmm.R lcmm/R/VarCov.lcmm.R lcmm/R/VarExpl.lcmm.R lcmm/R/summary.lcmm.R lcmm/R/Ordlcmm.R lcmm/R/predictL.Jointlcmm.R lcmm/R/firstlib.R lcmm/R/Diffepoce.R lcmm/R/VarCovRE.hlme.R lcmm/R/plot.predictL.R lcmm/R/predictL.multlcmm.R lcmm/R/postprob.hlme.R lcmm/R/cuminc.R lcmm/R/plotlinkfunctionmult.R lcmm/R/VarCovRE.Jointlcmm.R
lcmm/MD5
lcmm/DESCRIPTION
lcmm/THANKS
lcmm/man
lcmm/man/paquid.Rd lcmm/man/ForInternalUse.Rd lcmm/man/plot.predict.Rd lcmm/man/print.lcmm.Rd lcmm/man/VarExpl.Rd lcmm/man/plot.lcmm.Rd lcmm/man/lcmm-package.Rd lcmm/man/plot.cuminc.Rd lcmm/man/fitY.Rd lcmm/man/gridsearch.Rd lcmm/man/Diffepoce.Rd lcmm/man/data_lcmm.Rd lcmm/man/plot.pred.accuracy.Rd lcmm/man/estimates.Rd lcmm/man/multlcmm.Rd lcmm/man/data_hlme.Rd lcmm/man/VarCov.Rd lcmm/man/lcmm.Rd lcmm/man/epoce.Rd lcmm/man/cuminc.Rd lcmm/man/standardMethods.Rd lcmm/man/Jointlcmm.Rd lcmm/man/postprob.Rd lcmm/man/dynpred.Rd lcmm/man/summary.lcmm.Rd lcmm/man/summarytable.Rd lcmm/man/plot.dynpred.Rd lcmm/man/hlme.Rd lcmm/man/predictY.Rd lcmm/man/VarCovRE.Rd lcmm/man/WaldMult.Rd lcmm/man/predictlink.Rd lcmm/man/predictL.Rd

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