| ldhmm-class | R Documentation |
This S4 class is the major object class for ldhmm package
callThe match.call slot
mnumeric, length 1, number of states
param.nbrnumeric, number of parameters (2 or 3) for each ecld object
parammatrix, natural parameters for ecld objects, size of states times param.nbr.
Each row can be 2-parameter sequences, or 3-parameter sequences.
Three-parameter unit (mu, sigma, lambda) forms an ecld object
representing a leptokurtic symmetric lambda distribution.
On the other hand, to provide compatibility to a normal distribution HMM,
two-parameter unit (mu, sigma) forms an ecld object with lambda=1.
gammamatrix, the transition probability matrix, must be m by m.
deltanumeric, the initial distribution for each state, default is NULL.
stationarylogical, specify whether the initial distribution is stationary or not,
default is TRUE.
mle.optimizercharacter, the MLE optimizer. Currently it is just set to "nlm".
return.codenumeric, the return code from the MLE optimizer.
iterationsnumeric, number of iterations MLE optimizer takes.
mllknumeric, the final mllk value.
AICnumeric, the final AIC.
BICnumeric, the final BIC.
observationsnumeric, stores the observations post optimization
states.probmatrix, stores the state probabilities post optimization
states.localnumeric, stores the local decoding states post optimization
states.globalnumeric, stores the global decoding states post optimization (Viterbi)
states.local.statsmatrix, stores the statistics of local states post optimization
states.global.statsmatrix, stores the statistics of global states post optimization
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