GSE54650: Gene expression data for GSE54650

In limorhyde2: Quantify Rhythmicity and Differential Rhythmicity in Genomic Data

Gene expression data for GSE54650

Description

Data are based on total RNA, measured by microarray, obtained from livers of wild-type mice at various times after transfer to constant darkness. To save space and time, the data include only a subset of genes, and so are mainly useful for examples of how to use limorhyde2.

Usage

GSE54650

Format

A list with two elements:

• y: Matrix of normalized, log-transformed expression values. Rows correspond to genes (rownames are Entrez Gene IDs) and columns to samples.

• metadata: data.table with one row per sample. time is in hours.

Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54650

See Also

GSE34018, getModelFit()

limorhyde2 documentation built on Feb. 16, 2023, 7:43 p.m.