logconPH: CoxPH Model with Log Concave Baseline Distribution

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Computes a cox PH model with a log concave baseline distribution. If no covariates are provided, estimates the log concave NPMLE. Built specifically for interval censored data, where data is a n by 2 matrix with [i, 1] as the left side of the interval for subject i and [i,2] as right side. Uncensored data can be entered by setting [i,1] = [i,2]. Alternatively, this can also handle uncensored data. If all the data is uncensored, you may enter data as a length(n) vector.

Author
Clifford Anderson-Bergman
Date of publication
2014-12-14 18:56:04
Maintainer
Clifford Anderson-Bergman <cianders@uci.edu>
License
GPL-2
Version
1.5

View on CRAN

Man pages

dLC
Density estimates from a log concave fit
linesLC
Draws Lines for Logconcave Fit
logconcave
Cox PH model with Log Concave Baseline
logconPH-package
Computing a Cox PH Model with a Log Concave Baseline
pLC
Probability estimates from a log concave fit
plotLC
Plots Logconcave Fit
qLC
Quantiles estimates from a log concave fit
simCensored
Simulate current status data from Cox-PH model
sim_Censored
Simulate current status data from a beta(2,2) distribution

Files in this package

logconPH
logconPH/src
logconPH/src/logconPH.cpp
logconPH/src/Cpp2Source
logconPH/src/Cpp2Source/baseClass.h
logconPH/src/Cpp2Source/baseClass.cpp
logconPH/src/Cpp2Source/Array.cc
logconPH/src/Cpp2Source/logconcave.cpp
logconPH/src/Cpp2Source/Array.hh
logconPH/src/Cpp2Source/QuadProg++.hh
logconPH/src/Cpp2Source/QuadProg++.cc
logconPH/NAMESPACE
logconPH/R
logconPH/R/LogConcave.R
logconPH/MD5
logconPH/DESCRIPTION
logconPH/man
logconPH/man/plotLC.Rd
logconPH/man/dLC.Rd
logconPH/man/qLC.Rd
logconPH/man/logconPH-package.Rd
logconPH/man/pLC.Rd
logconPH/man/simCensored.Rd
logconPH/man/linesLC.Rd
logconPH/man/logconcave.Rd
logconPH/man/sim_Censored.Rd