longreadvqs-package: longreadvqs: Viral Quasispecies Comparison from Long-Read...
In longreadvqs: Viral Quasispecies Comparison from Long-Read Sequencing Data
longreadvqs-package R Documentation
longreadvqs: Viral Quasispecies Comparison from Long-Read Sequencing Data
Description
Performs variety of viral quasispecies diversity analyses [see Pamornchainavakul et al. (2024) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.21203/rs.3.rs-4637890/v1")}] based on long-read sequence alignment. Main functions include 1) sequencing error and other noise minimization and read sampling, 2) Single nucleotide variant (SNV) profiles comparison, and 3) viral quasispecies profiles comparison and visualization.
Author(s)
Maintainer: Nakarin Pamornchainavakul pamornakarin@gmail.com (ORCID)
See Also
Useful links:
longreadvqs documentation built on Sept. 11, 2024, 6:29 p.m.
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| longreadvqs-package | R Documentation |
longreadvqs: Viral Quasispecies Comparison from Long-Read Sequencing Data
Description
Performs variety of viral quasispecies diversity analyses [see Pamornchainavakul et al. (2024) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.21203/rs.3.rs-4637890/v1")}] based on long-read sequence alignment. Main functions include 1) sequencing error and other noise minimization and read sampling, 2) Single nucleotide variant (SNV) profiles comparison, and 3) viral quasispecies profiles comparison and visualization.
Author(s)
Maintainer: Nakarin Pamornchainavakul pamornakarin@gmail.com (ORCID)
See Also
Useful links:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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