asb.sp.summary: Summarize Assemblage x Species data frame

In mFD: Compute and Illustrate the Multiple Facets of Functional Diversity

Summarize Assemblage x Species data frame

Description

This function computes a summary helping you to picture assemblages. For this function to work, there must be no NA in your asb_sp_w data frame.

Usage

asb.sp.summary(asb_sp_w)

Arguments

asb_sp_w

a matrix showing assemblages (rows) composition in species (columns). Note that species names must be the names of rows.

Value

A list with:

asb_sp_w_occ	a matrix with species occurrences in each assemblage.
sp_tot_w	a vector gathering species biomass/abundance per species.
asb_tot_w	a vector gathering total abundance/biomass per assemblage.
asb_sp_richn	a vector gathering species richness per assemblage.
asb_sp_nm	a list gathering the names of species of each assemblage.

Author(s)

Camille Magneville and Sebastien Villeger

Examples

# Load Assemblages x Species Matrix
data('baskets_fruits_weights', package = 'mFD')

# Summarize Assemblages Data
mFD::asb.sp.summary(asb_sp_w = baskets_fruits_weights)

mFD documentation built on May 29, 2024, 7:25 a.m.