mHG: Minimum-Hypergeometric Test
Version 1.0

Runs a minimum-hypergeometric (mHG) test as described in: Eden, E. (2007). Discovering Motifs in Ranked Lists of DNA Sequences. Haifa.

AuthorKobi Perl
Date of publication2015-07-26 09:23:57
MaintainerKobi Perl <kobipe3@gmail.com>
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("mHG")

Getting started

Package overview

Popular man pages

mHG-package: Minimum-Hypergeometric Test
mHG.pval.calc: Calculate the p-value of a minimum-hypergeometric (mHG)...
mHG.statistic.calc: Calculate the minimum-hypergeometric (mHG) statistic.
mHG.statistic.info-class: Class '"mHG.statistic.info"'
mHG.test: Perform Minimum-Hypergeometric test.
See all...

All man pages Function index File listing

Man pages

mHG-package: Minimum-Hypergeometric Test
mHG.pval.calc: Calculate the p-value of a minimum-hypergeometric (mHG)...
mHG.statistic.calc: Calculate the minimum-hypergeometric (mHG) statistic.
mHG.statistic.info-class: Class '"mHG.statistic.info"'
mHG.test: Perform Minimum-Hypergeometric test.

Functions

HG_row_n.calc Source code
HG_row_n.calc.iter Source code
HG_row_n.calc.recur Source code
R_separation_line.calc Source code
d_ratio Source code
mHG.pval.calc Man page Source code
mHG.statistic.calc Man page Source code
mHG.statistic.info-class Man page
mHG.test Man page Source code
mHT Man page
mHT-package Man page
pi_r.calc Source code
v_ratio Source code

Files

inst
inst/CITATION
tests
tests/testthat.R
tests/testthat
tests/testthat/test-mHG.R
NAMESPACE
R
R/mHG.R
MD5
DESCRIPTION
man
man/mHG.pval.calc.Rd
man/mHG.test.Rd
man/mHG.statistic.calc.Rd
man/mHG.statistic.info-class.Rd
man/mHG-package.Rd
mHG documentation built on May 19, 2017, 8:55 p.m.

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