maGUI: A Graphical User Interface for Microarray Data Analysis

Provides a Graphical User Interface for Microarray Data Analysis. Protein protein interactions can also be predicted from two normalized microarray data.

Author
Dhammapal Bharne, Praveen Kant, Vaibhav Vindal
Date of publication
2015-10-12 09:20:42
Maintainer
Dhammapal Bharne <dhammapalb@uohyd.ac.in>
License
GPL-2
Version
1.0

View on CRAN

Man pages

affym
Preprocessing and Analysis of Loaded Affymetrix Data
agone
Preprocessing and Analysis of Loaded Agilent_OneColor Data
agtwo
Preprocessing and Analysis of Loaded Agilent_TwoColor Data
clas
Classification of Differentially Expression Genes
clust
Clustering of Normalized Microarray Data
dge
Differntial Gene Expression of Filtered Data
dmo
Preprocessing and Analysis of Loaded Online Data
dmsm
Preprocessing and Analysis of Loaded Series_Matrix Data
filter_sp
Specific Filtering on Normalized Microarray Data
filter_unsp
UnSpecific Filtering on Normalized Microarray Data
gsea
Gene Set Enrichment Analysis of Microarray Data
gsta
Gene Set Test Analysis of Microarray Data
illbead
Preprocessing and Analysis of Loaded Illumina_Beadarray Data
illlumi
Preprocessing and Analysis of Loaded Illumina_Lumi Data
maGUI
A Graphical User Interface for Microarray Data Analysis
maGUI-package
A Graphical User Interface for Microarray Data Analysis
nimblg
Preprocessing and Analysis of Loaded Nimblegen Data
ntwk
Co-regulated Network for Differentially Expressed Genes
pca
Pricipal Component Analysis on Normalized Microarray Data
ppis
Protein-Protein Interactions Prediction from Microarray Data
sse
Sample Size Estimation on Normalized Microarray Data
stat_sign
Statisitical Significance of Filtering Data
symbol
Mapping of Identifiers of Microarray Data to Genes

Files in this package

maGUI
maGUI/NAMESPACE
maGUI/R
maGUI/R/filter_specific.R
maGUI/R/dendro.R
maGUI/R/pca.R
maGUI/R/affym.R
maGUI/R/dmo.R
maGUI/R/choosefile.R
maGUI/R/illlumi.R
maGUI/R/dmsm.R
maGUI/R/illbead.R
maGUI/R/gsea.R
maGUI/R/filter_unspecific.R
maGUI/R/dge.R
maGUI/R/choosefolder.R
maGUI/R/ntwk.R
maGUI/R/symbol.R
maGUI/R/cluster.R
maGUI/R/nimblg.R
maGUI/R/agone.R
maGUI/R/agtwo.R
maGUI/R/maGUI.R
maGUI/R/stat_sign.R
maGUI/R/class.R
maGUI/R/gsta.R
maGUI/R/ppis.R
maGUI/R/sse.R
maGUI/MD5
maGUI/DESCRIPTION
maGUI/man
maGUI/man/gsta.Rd
maGUI/man/symbol.Rd
maGUI/man/maGUI-package.Rd
maGUI/man/affym.Rd
maGUI/man/dmo.Rd
maGUI/man/maGUI.Rd
maGUI/man/ntwk.Rd
maGUI/man/nimblg.Rd
maGUI/man/dge.Rd
maGUI/man/filter_unsp.Rd
maGUI/man/sse.Rd
maGUI/man/stat_sign.Rd
maGUI/man/filter_sp.Rd
maGUI/man/ppis.Rd
maGUI/man/pca.Rd
maGUI/man/dmsm.Rd
maGUI/man/gsea.Rd
maGUI/man/agone.Rd
maGUI/man/illlumi.Rd
maGUI/man/illbead.Rd
maGUI/man/clas.Rd
maGUI/man/agtwo.Rd
maGUI/man/clust.Rd