Man pages for magi
MAnifold-Constrained Gaussian Process Inference
| calCov | Calculate stationary Gaussian process kernel |
| FNdat | Dataset of noisy observations from the FitzHugh-Nagumo (FN)... |
| fnmodelODE | The FitzHugh-Nagumo (FN) equations |
| gpcov | Conditional covariance of Gaussian process given observations |
| gpmean | Conditional mean of Gaussian process given observations |
| gpsmoothing | Gaussian process smoothing |
| gpsmoothllik | Marginal log-likelihood for Gaussian process smoothing |
| hes1modelODE | Hes1 equations: oscillation of mRNA and protein levels |
| is.magioutput | MagiSolver output ('magioutput') object |
| magi | 'magi': MAnifold-Constrained Gaussian Process Inference |
| MagiPosterior | MAGI posterior density |
| MagiSolver | MAnifold-constrained Gaussian process Inference (MAGI) |
| plot.magioutput | Generate plots from 'magioutput' object |
| ptransmodelODE | Protein transduction model |
| setDiscretization | Set discretization level |
| summary.magioutput | Summary of parameter estimates from 'magioutput' object |
| testDynamicalModel | Test dynamic system model specification |
