magree: O'Connell-Dobson-Schouten estimators for multiobserver...

In magree: Implements the O'Connell-Dobson-Schouten Estimators of Agreement for Multiple Observers

Description

Use the O'Connell-Dobson-Schouten estimators of agreement for nominal or ordinal data.

Usage

magree(X, weights=c("unweighted","linear","quadratic"), score = NULL)

Arguments

X	A matrix or data-frame with observations/subjects as rows and raters as columns.
weights	"unweighted" For nominal categories - only perfect agreement is counted. "linear" For ordinal categories where disagreement is proportional to the distance between the categories. This is analogous to the agreement weights w_{i,j}=1-|score[i]-score[j]|/(max(score)-min(score)). "quadratic" For ordinal categories where disagreement is proportional to the square of the distance between the categories. This is analogous to the agreement weights w_{i,j}=1-(score[i]-score[j])^2/(max(score)-min(score))^2.
score	The scores that are to be assigned to the categories. Currently, this defaults to a sorted list of the unique values.

Details

The Fortran code from Professor Dianne O'Connell was adapted for R.

The output object is very similar to the Fortan code. Not all of the variance terms are currently used in the print and summary methods.

Value

oconnell	object from the oconnell function
schouten	object from the schouten function
call	As per sys.call(), to allow for using update

See Also

oconnell, schouten.

Examples

## Table 1 (O'Connell and Dobson, 1984)
summary(fit <- magree(landis, weights="unweighted"))
update(fit, weights="linear")
update(fit, weights="quadratic")

## Table 5, O'Connell and Dobson (1984)
magree(landis==1)
magree(landis==2)
magree(landis==3)
magree(landis==4)
magree(landis==5)

## Plot of the marginal distributions
plot(fit) 

## Plot of the average agreement by observer
plot(fit, type="kappa by observer") 

magree documentation built on Sept. 3, 2020, 9:07 a.m.