pairmod: Find best performing pairs

Description Usage Arguments Value

View source: R/pairmod.R

Description

Combine each gene in initial set with all genes in the original set. Top npair pairs are selected to construct the Q matrix.

Usage

1
pairmod(X, LX, theta, npair = 10)

Arguments

X

Original gene expression data matrix. With G rows (number of genes) and S column (number of samples).

LX

Class labels.

theta

Initial gene set.

npair

Given a gene in initial set, top npair best performing pairs correspond to that gene are selected (Default is 10).

Value

Best (npair*G/20) performing pairs.


malani documentation built on May 30, 2017, 3:25 a.m.

Search within the malani package
Search all R packages, documentation and source code