map.country: Produce map, color map and disease map of a country

Description Usage Arguments Details Author(s) References See Also Examples

Description

Produce map of a country including simple map, color-shaded map and disease maping.

The function reads shapefile using readOGR function of the package “rgdal" which requires both the directory location of shapefiles and the name of the shapefile (without the .shp extension). Reading shapefile using readOGR function creates an object of class “SpatialPolygonsDataFrame" which has been used to produce administrative boundary map of different regions.

Usage

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map.country(shapedir = "WorkingDir", shapename, boundary.label = NULL, 
spe.vector = NULL, cex = 0.8, col = "lightblue")

Arguments

shapedir

Directory path where the shape files were kept. If not specified, it assumes that the shape files are in the current working directory. Character. Default is "WorkingDir".

shapename

Name of shape file excluding extension (.shp). Character.

boundary.label

Boundary label vector name supplied from the shape file. See info.shape() to know this input. Default is NULL. See details below.

spe.vector

Vector of region (names of areas). Default is NULL. See details below.

cex

Size of region name. Default is 0.8.

col

Color of shaded areas. Default is "lightblue". See color10() for more colors, particularly disease mapping.

Details

Object of class “SpatialPolygonsDataFrame" has different slots to hold polygons with attributes. A shapefile usually contains country subdivision or administrative division (province, district, upazila etc). The largest administrative subdivision is called “first administrative level" followed by "second administrative level" and so on. If we want administrative boundary map of first administrative level having administrative areas “X", “Y" and “Z", we need to specify, in boundary.label parameter, which column (column name) contains “X", “Y" and “Z".

The above information of country subdivision columns and area names can be viewed by info.shape function. Use same spelling as viewed by info.shape() function.

Author(s)

Mazharul Islam, Jahidur Rahman Khan and Hasinur Rahaman Khan

References

www.gadm.org, version 2.8, November 2015.

Pineda, M. C., Lpez-Legentil, S., & Turon, X. (2011). The whereabouts of an ancient wanderer: global phylogeography of the solitary ascidian Styela plicata. PLoS One, 6(9), e25495. DOI: 10.1371/journal.pone.0025495.

Zhao, K., Tung, C. W., Eizenga, G. C., Wright, M. H., Ali, M. L., Price, A. H., ... & McClung, A. M. (2011). Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa. Nature communications, 2, 467. doi:10.1038/ncomms1467.

Bivand, R. S., Pebesma, E. J., Gomez-Rubio, V., & Pebesma, E. J. (2008). Applied spatial data analysis with R (Vol. 747248717). New York: Springer.

http://www.caliper.com/Support/answer11.htm

http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691&currTab=simple

http://ungiwg.org/coreDB

See Also

info.shape

Examples

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filePATH <- system.file("Bangladesh", package="mapReasy")

map.country(shapedir= filePATH, shapename="BGD_adm1")

mapReasy documentation built on May 1, 2019, 7:59 p.m.