mapfuser: Construct Consensus Genetic Maps and Estimate Recombination Rates

Construct consensus genetic maps with LPmerge, see Endelman and Plomion (2014) <doi:10.1093/bioinformatics/btu091> and model the relationship between physical distance and genetic distance using thin-plate regression splines, see Wood (2003) <doi:10.1111/1467-9868.00374>. Perform quality control on input data and visualise intermediate steps.

Package details

AuthorDennis van Muijen, Ram Kumar Basnet, Nathalie J. Dek
MaintainerDennis van Muijen <[email protected]>
LicenseGPL-3
Version0.1.2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("mapfuser")

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mapfuser documentation built on Oct. 10, 2017, 5:07 p.m.