mcemGLM: Maximum Likelihood Estimation for Generalized Linear Mixed Models

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Maximum likelihood estimation for generalized linear mixed models via Monte Carlo EM.

Author
Felipe Acosta Archila
Date of publication
2015-11-29 09:06:45
Maintainer
Felipe Acosta Archila <acosta@umn.edu>
License
GPL (>= 2)
Version
1.1

View on CRAN

Man pages

anova.mcemGLMM
Anova method for mcemGLMM objects
coef.mcemGLMM
Anova method for mcemGLMM objects
contrasts.mcemGLMM
Contrast estimation for mcemGLMM objects
covMat.mcemGLMM
Anova method for mcemGLMM objects
epilepsy
Epilesy Data
exdata
Example data
mcemGLMM
Generalized Linear Mixed Models Estimation
mcemGLMMext
Extending the Iterations of a Model Fitted with mcemGLMM
mcemGLM-package
Generalized Linear Mixed Model Estimation via Monte Carlo EM
predict.mcemGLMM
Predict method for mcemGLMM objects
ranef.mcemGLMM
Anova method for mcemGLMM objects
residuals.mcemGLMM
Residual extraction method for mcemGLMM objects
salamander
Salamander Data
simData
Data used for fitting examples
summary.mcemGLMM
Summary method for mcemGLMM objects

Files in this package

mcemGLM
mcemGLM/inst
mcemGLM/inst/doc
mcemGLM/inst/doc/mcemGLM-vignette.R
mcemGLM/inst/doc/mcemGLM-vignette.pdf
mcemGLM/inst/doc/mcemGLM-vignette.Rnw
mcemGLM/src
mcemGLM/src/MCMCloglikelihoodNegBinom_t.cpp
mcemGLM/src/loglikelihoodGammaGradient_n.cpp
mcemGLM/src/uSampler_n.cpp
mcemGLM/src/Makevars
mcemGLM/src/iMatrixDiag_n.cpp
mcemGLM/src/loglikelihoodNegBinom_t.cpp
mcemGLM/src/loglikelihoodLogit_n.cpp
mcemGLM/src/qFunctionDiag_n.cpp
mcemGLM/src/loglikelihoodNegBinom_n.cpp
mcemGLM/src/loglikelihoodNegBinomGradient_n.cpp
mcemGLM/src/qFunctionDiagGamma_n.cpp
mcemGLM/src/qFunctionDiagPoisson_t.cpp
mcemGLM/src/loglikelihoodLogitGradient_t.cpp
mcemGLM/src/loglikelihoodGammaHessian_n.cpp
mcemGLM/src/iMatrixDiagPoisson_n.cpp
mcemGLM/src/iMatrixDiag_t.cpp
mcemGLM/src/iMatrixDiagGamma_t.cpp
mcemGLM/src/loglikelihoodGammaHessian_t.cpp
mcemGLM/src/uSamplerGamma_t.cpp
mcemGLM/src/loglikelihoodPoissonHessian_t.cpp
mcemGLM/src/loglikelihoodLogitHessian_t.cpp
mcemGLM/src/mcemGLM.h
mcemGLM/src/mcemGLMutil.cpp
mcemGLM/src/MCMCloglikelihoodGamma_n.cpp
mcemGLM/src/MCMCloglikelihoodGamma_t.cpp
mcemGLM/src/loglikelihoodNegBinomHessian_t.cpp
mcemGLM/src/loglikelihoodLogitHessian_n.cpp
mcemGLM/src/loglikelihoodPoisson_t.cpp
mcemGLM/src/MCMCloglikelihoodLogit_n.cpp
mcemGLM/src/MCMCloglikelihoodPoisson_n.cpp
mcemGLM/src/iMatrixDiagNegBinom_t.cpp
mcemGLM/src/loglikelihoodNegBinomHessian_n.cpp
mcemGLM/src/margloglikelihoodLogit_n.cpp
mcemGLM/src/loglikelihoodLogitGradient_n.cpp
mcemGLM/src/qFunction.cpp
mcemGLM/src/loglikelihoodPoissonHessian_n.cpp
mcemGLM/src/loglikelihoodGamma_n.cpp
mcemGLM/src/uSamplerGamma_n.cpp
mcemGLM/src/uSamplerPoisson_n.cpp
mcemGLM/src/uSamplerNegBinom_t.cpp
mcemGLM/src/uSamplerPoisson_t.cpp
mcemGLM/src/margloglikelihoodLogit_t.cpp
mcemGLM/src/uSamplerNegBinom_n.cpp
mcemGLM/src/loglikelihoodGamma_t.cpp
mcemGLM/src/MCMCloglikelihoodNegBinom_n.cpp
mcemGLM/src/loglikelihoodGammaGradient_t.cpp
mcemGLM/src/uSampler.cpp
mcemGLM/src/qFunctionDiagGamma_t.cpp
mcemGLM/src/loglikelihoodPoissonGradient_n.cpp
mcemGLM/src/iMatrixDiagPoisson_t.cpp
mcemGLM/src/qFunctionDiag_t.cpp
mcemGLM/src/MCMCloglikelihoodLogit_t.cpp
mcemGLM/src/qFunctionDiagPoisson_n.cpp
mcemGLM/src/loglikelihoodLogit_t.cpp
mcemGLM/src/qFunctionDiagNegBinom_n.cpp
mcemGLM/src/Makevars.win
mcemGLM/src/qFunction_n.cpp
mcemGLM/src/RcppExports.cpp
mcemGLM/src/loglikelihoodPoissonGradient_t.cpp
mcemGLM/src/iMatrixDiagGamma_n.cpp
mcemGLM/src/qFunctionDiagNegBinom_t.cpp
mcemGLM/src/loglikelihoodNegBinomGradient_t.cpp
mcemGLM/src/loglikelihoodPoisson_n.cpp
mcemGLM/src/MCMCloglikelihoodPoisson_t.cpp
mcemGLM/src/iMatrixDiagNegBinom_n.cpp
mcemGLM/NAMESPACE
mcemGLM/data
mcemGLM/data/salamander.rdata
mcemGLM/data/exdata.rdata
mcemGLM/data/simData.rdata
mcemGLM/data/epilepsy.rdata
mcemGLM/R
mcemGLM/R/mcemGLMMext.R
mcemGLM/R/mcemMLE_n.R
mcemGLM/R/contrasts.mcemGLMM.R
mcemGLM/R/mcemMLEPoisson_n.R
mcemGLM/R/toMaxDiag_t.R
mcemGLM/R/coef.mcemGLMM.R
mcemGLM/R/mcemMLENegBinom_n.R
mcemGLM/R/covMat.mcemGLMM.R
mcemGLM/R/toMaxDiag_n.R
mcemGLM/R/toMaxDiagPoisson_t.R
mcemGLM/R/toMaxDiagGamma_n.R
mcemGLM/R/residuals.mcemGLMM.R
mcemGLM/R/ranef.mcemGLMM.R
mcemGLM/R/mcemMLE_t_fixed_df.R
mcemGLM/R/anova.mcemGLMM.R
mcemGLM/R/RcppExports.R
mcemGLM/R/mcemMLENegBinom_t_fixed_df.R
mcemGLM/R/toMaxDiagGamma_t.R
mcemGLM/R/toMaxDiagNegBinom_n.R
mcemGLM/R/mcemMLEGamma_t_fixed_df.R
mcemGLM/R/toMaxDiagPoisson_n.R
mcemGLM/R/mcemMLEGamma_n.R
mcemGLM/R/predict.mcemGLMM.R
mcemGLM/R/toMaxDiagNegBinom_t.R
mcemGLM/R/constructSigma.R
mcemGLM/R/summary.mcemGLMM.R
mcemGLM/R/mcemMLEPoisson_t_fixed_df.R
mcemGLM/R/mcemGLMM.R
mcemGLM/vignettes
mcemGLM/vignettes/references.bib
mcemGLM/vignettes/mcemGLM-vignette.Rnw
mcemGLM/MD5
mcemGLM/build
mcemGLM/build/vignette.rds
mcemGLM/DESCRIPTION
mcemGLM/man
mcemGLM/man/contrasts.mcemGLMM.Rd
mcemGLM/man/summary.mcemGLMM.Rd
mcemGLM/man/mcemGLMMext.Rd
mcemGLM/man/covMat.mcemGLMM.Rd
mcemGLM/man/anova.mcemGLMM.Rd
mcemGLM/man/mcemGLMM.Rd
mcemGLM/man/epilepsy.Rd
mcemGLM/man/residuals.mcemGLMM.Rd
mcemGLM/man/coef.mcemGLMM.Rd
mcemGLM/man/mcemGLM-package.Rd
mcemGLM/man/exdata.Rd
mcemGLM/man/simData.Rd
mcemGLM/man/ranef.mcemGLMM.Rd
mcemGLM/man/predict.mcemGLMM.Rd
mcemGLM/man/salamander.Rd