ca_help | R Documentation |
ca
objectsThe functions row_pcoord()
and col_pcoord()
retrieve the coordinates of
the rows and columns of a ca
object across all dimensions.
The functions xlim4ca()
and ylim4ca()
return the range of values for the
first and second dimensions.
row_pcoord(x, ...) col_pcoord(x, ...) xlim4ca(x, ...) ylim4ca(x, ...)
x |
An object of class |
... |
Additional arguments (not implemented). |
In the output of row_pcoord()
, each row corresponds to a row from the dataframe
that ca::ca()
was applied to, and each column corresponds to a principal component.
In the output of col_pcoord()
, each row corresponds to a column from the dataframe
that ca::ca()
was applied to, and each column corresponds to a principal component.
A matrix (for row_pcoord()
and col_pcoord()
) or a numeric vector
(for xlim4ca()
and ylim4ca()
).
row_pcoord()
: Retrieve row principal coordinates for all dimensions
col_pcoord()
: Retrieve column principal coordinates for all dimensions
xlim4ca()
: Return range of first dimension for plotting
ylim4ca()
: Return range of second dimension for plotting
# traditional biplot from {ca} library(ca) data("author") author_ca <- ca(author) plot(author_ca) # alternative plot with {mclm} tools r_pc <- row_pcoord(author_ca) c_pc <- col_pcoord(author_ca) xlim <- xlim4ca(author_ca) ylim <- ylim4ca(author_ca) author_names <- as.factor(gsub( "^.*?\\((.*?)\\)$", "\\1", rownames(author), perl = TRUE)) plot(r_pc[,1], r_pc[,2], pch = 18, xlim = xlim, ylim = ylim, xlab = "", ylab = "", main = "authors and their alphabet", col = as.numeric(author_names)) abline(h = 0, col = "gray", lty = 3) abline(v = 0, col = "gray", lty = 3) text(c_pc[,1], c_pc[,2], colnames(author), col = "gray") legend("topright", legend = levels(author_names), pch = rep(18, length(levels(author_names))), col = 1:length(levels(author_names)), title = "authors")
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