mhtboot: Multiple Hypothesis Test Based on Distribution of p Values

A framework for multiple hypothesis testing based on distribution of p values. It is well known that the p values come from different distribution for null and alternatives, in this package we provide functions to detect that change. We provide a method for using the change in distribution of p values as a way to detect the true signals in the data.

Author
Abhirup Mallik [aut, cre]
Date of publication
2016-10-30 22:14:24
Maintainer
Abhirup Mallik <malli066@umn.edu>
License
GPL-3
Version
1.3.3

View on CRAN

Man pages

datgen
datgen
elbow
Finding corner of a vector of ordered transformed p values
hitplots
Plot area under p value cdf below a cutoff.
mht.1sample
Multiple hypothesis testing based on p value distribution for...
mhtboot
mhtboot: A package for multiple hypothesis testing using...
pboot.1sample
Generate Bootstrap Distribution of p values for one sample...
pboot.1sample.s
Generate p value distributions and estimate of sample...
pboot.2sample
Generate bootstrap distribution of p values based on user...
plotchange
plotchange
plotpboot
Quantile plots for p value distributions.
ptrans
Transformation of order statistics of the p value...
qelbow
Finding corner of a quantile of ordered transformed p values

Files in this package

mhtboot
mhtboot/inst
mhtboot/inst/doc
mhtboot/inst/doc/vignette1.Rnw
mhtboot/inst/doc/vignette1.R
mhtboot/inst/doc/vignette1.pdf
mhtboot/NAMESPACE
mhtboot/R
mhtboot/R/mhtboot.R
mhtboot/R/simulationfunctions.R
mhtboot/R/mhtfunctions.R
mhtboot/R/changefunctions.R
mhtboot/R/bootfunctions.R
mhtboot/vignettes
mhtboot/vignettes/vignette1.Rnw
mhtboot/vignettes/vignette1-concordance.tex
mhtboot/MD5
mhtboot/build
mhtboot/build/vignette.rds
mhtboot/DESCRIPTION
mhtboot/man
mhtboot/man/mhtboot.Rd
mhtboot/man/qelbow.Rd
mhtboot/man/hitplots.Rd
mhtboot/man/ptrans.Rd
mhtboot/man/pboot.2sample.Rd
mhtboot/man/pboot.1sample.Rd
mhtboot/man/elbow.Rd
mhtboot/man/plotchange.Rd
mhtboot/man/pboot.1sample.s.Rd
mhtboot/man/mht.1sample.Rd
mhtboot/man/datgen.Rd
mhtboot/man/plotpboot.Rd