generate_experiment_list: Generate list of experiment names from user parameters

In microdiluteR: Analysis of Broth Microdilution Assays

Generate list of experiment names from user parameters

Description

generate_experiment_list generates a list of provided experiment names extracted from file names.

ask_experiment_list works the same way as generate_experiment_list, but retrieves the experiment names based on a user prompt instead of user-set parameters.

Usage

generate_experiment_list(experiment_names, file_list)

ask_experiment_list(file_list)

Arguments

experiment_names	A character vector containing names for each experiment.
file_list	A character vector of file IDs. Used to extract experiment IDs from.

Details

generate_experiment_list extracts unique identifiers from file names and matches them with the provided experiment names. If the number of experiment names does not match the number of unique identifiers extracted from the file names, it throws an error. If the lengths match, it generates a list of experiment names where each name is associated with a unique identifier extracted from the file names.

Value

generate_experiment_list returns a list of experiment names where each level is assigned to a corresponding row or column based on the selected direction parameter.

ask_experiment_list returns a list containing experiment identifiers as keys and experiment names as values.

See Also

generate_group_list, ask_group_list, add_treatment, add_concentration

microdiluteR documentation built on June 22, 2024, 11:07 a.m.