mixer: Random graph clustering
Version 1.8

Routines for the analysis (unsupervised clustering) of networks using MIXtures of Erdos-Renyi random graphs

Browse man pages Browse package API and functions Browse package files

AuthorChristophe Ambroise [aut], Gilles Grasseau [aut], Mark Hoebeke [aut], Pierre Latouche [aut, cre], Vincent Miele [aut], Franck Picard [aut], LAPACK authors [aut] (copyrights apply to src/*.f)
Date of publication2015-01-15 21:06:21
MaintainerPierre Latouche <pierre.latouche@univ-paris1.fr>
LicenseGPL (>= 2)
Version1.8
URL http://ssbgroup.fr/mixnet/mixer.html http://ssbgroup.fr
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("mixer")

Man pages

a_mixer: MIXtures of Erdos-Renyi random graphs
b_graph.affiliation: Simulation of an Affiliation Graph
c_plot.mixer: Plot of mixer object
d_getModel: Get the parameters of a model
d_getModel.mixer: Get the model parameters
e_setSeed: Set internal seed
t_blog: French Political Blogosphere network
u_macaque: Connection of macaque brain cortical regions

Functions

AdjMat2Edges Source code
CalcDegrees Source code
Gplot Source code
Gplot.default Source code
Gplot.edgeMIXER Source code
Gplot.graphics Source code
Gplot.network Source code
Gplot.pie.nodes Source code
Gplot.vertex Source code
Gplot.vertex.label Source code
Gplot.vertex.pie Source code
Symmetrize Source code
VEstep.C Source code
VMstep Source code
VariationalBayes Source code
addadjmatedge.spmgraph Source code
addedge.spmgraph Source code
addedgetoadjacencymatrix.spmgraph Source code
blog Man page
buildfromadjacencymatrix.spmgraph Source code
class.ind Source code
color.lightening Source code
draw.arc Source code
draw.cercle Source code
draw.edges Source code
draw.loops Source code
draw.rot.poly Source code
draw.sector Source code
getConnectedNodes Source code
getDegree Source code
getMixnetNumbering Source code
getModel Man page Source code
getModel.mixer Man page Source code
getNodeName Source code
graph.affiliation Man page Source code
indextolabel.spmgraph Source code
is.mixer Source code
is.symmetric Source code
isolate.vertices Source code
light.palette Source code
lowerBound Source code
macaque Man page
mixer Man page Source code
mixture Source code
onLoad Source code
parseline.spmgraph Source code
plot.mixer Man page Source code
plotam Source code
ploticl Source code
plotmixture Source code
plotparam Source code
randError Source code
readfromfile.spmgraph Source code
removeLoops Source code
renumberNodes Source code
setSeed Man page Source code
spectralkmeans Source code
sub.param Source code

Files

COPYING
inst
inst/CITATION
inst/COPYRIGHTS
inst/spm
inst/spm/club_foot.spm
inst/spm/macaque_matrix.spm
src
src/Emd.h
src/dswap.f
src/Makevars
src/OCEm.h
src/dlaruv.f
src/dlasy2.f
src/drot.f
src/dcopy.f
src/dstatn.f
src/dlapy2.f
src/dlamch.f
src/dnconv.f
src/ModelImprover.h
src/dnrm2.f
src/dlassq.f
src/dnaupd.f
src/Graph.cc
src/xerbla.f
src/SOCEm.cc
src/ModelImprover.cc
src/dsortc.f
src/Em.h
src/dger.f
src/dlarf.f
src/EmCore.h
src/vertex_layout.c
src/init_ermg_R.cc
src/dgetv0.f
src/matrix.cpp
src/dlanhs.f
src/dlascl.f
src/SOCEm.h
src/Ermg.h
src/dlacpy.f
src/ermg_R.cc
src/dtrevc.f
src/dlarfg.f
src/dlarfx.f
src/dlaexc.f
src/ermgo_R.cc
src/dnaup2.f
src/second.f
src/Barycenters.h
src/dlanv2.f
src/dnaitr.f
src/ivout.f
src/EmCore.cc
src/Ermg.cc
src/dlange.f
src/util.h
src/stat.h
src/Barycenters.cc
src/dngets.f
src/ddot.f
src/OCEm.cc
src/dlahqr.f
src/lsame.f
src/debug.h
src/OEm.h
src/dladiv.f
src/dtrmm.f
src/dtrsen.f
src/dtrexc.f
src/dlaqrb.f
src/ModelDesigner.h
src/dgemv.f
src/dgeqr2.f
src/Graph.h
src/dlaln2.f
src/GraphReader.cc
src/dlaset.f
src/OEm.cc
src/dlarnv.f
src/dtrsyl.f
src/dscal.f
src/GraphReader.h
src/idamax.f
src/dlacon.f
src/ModelDesigner.cc
src/Ermdg.h
src/dasum.f
src/VEstep_R.cc
src/dneupd.f
src/dorm2r.f
src/dnapps.f
src/Emd.cc
src/BandMemMatrix.h
src/SparseMatrix.h
src/dmout.f
src/daxpy.f
src/dlabad.f
src/Em.cc
src/dneigh.f
src/dlartg.f
src/matrix.h
src/dvout.f
NAMESPACE
NEWS
data
data/blog.rda
data/macaque.rda
R
R/init.R
R/Gplot-internals.R
R/bayesianMixer.R
R/Gplot.R
R/mixer.R
R/spmgraph.R
MD5
DESCRIPTION
man
man/b_graph.affiliation.Rd
man/d_getModel.mixer.Rd
man/u_macaque.Rd
man/a_mixer.Rd
man/c_plot.mixer.Rd
man/e_setSeed.Rd
man/d_getModel.Rd
man/t_blog.Rd
mixer documentation built on May 19, 2017, 12:19 p.m.