modygliani: MOlecular DYnamics GLobal ANalysis
Version 1.0

RMSD and Internal Energy analysis of NAMD and YASARA Molecular Dynamics output files. Allows to comparison of different dynamics per different complexes. Input files have to be ASCII files tab separated.

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AuthorLuca Belmonte <luca.belmonte@unitn.it>, Sheref S. Mansy <sheref.mansy@unitn.it>
Date of publication2016-07-02 07:25:01
MaintainerLuca Belmonte <luca.belmonte@unitn.it>
LicenseMIT + file LICENSE
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("modygliani")

Man pages

modygliani: modygliani: MOlecular DYnamics GLobal ANalysis

Functions

MDA Source code
doubExponentialFitting Source code
exponentialFitting Source code
loadStats Source code
modygliani Man page Source code
statistics Source code

Files

inst
inst/extdata
inst/extdata/zn_CG
inst/extdata/co_CG
inst/extdata/output
inst/extdata/output/co_CG_stats.csv
inst/extdata/output/co_CG_rmsd.svg
inst/extdata/output/ni_CG_rmsd_hist.svg
inst/extdata/output/co_CG_hist.svg
inst/extdata/output/zn_CG_histo.csv
inst/extdata/output/zn_CG_energy.svg
inst/extdata/output/ni_CG_energy.svg
inst/extdata/output/zn_CG_rmsd_hist.svg
inst/extdata/output/fe_CG_energy.svg
inst/extdata/output/fe_CG_histo.csv
inst/extdata/output/zn_CG_hist.svg
inst/extdata/output/fe_CG_rmsd.svg
inst/extdata/output/zn_CG_rmsd.svg
inst/extdata/output/co_CG_rmsd_hist.csv
inst/extdata/output/fe_CG_stats.csv
inst/extdata/output/zn_CG_stats.csv
inst/extdata/output/ni_CG_rmsd_hist.csv
inst/extdata/output/co_CG_energy.svg
inst/extdata/output/fe_CG_rmsd_hist.svg
inst/extdata/output/ni_CG_rmsd.svg
inst/extdata/output/aggregates.svg
inst/extdata/output/zn_CG_rmsd_hist.csv
inst/extdata/output/ni_CG_stats.csv
inst/extdata/output/fe_CG_hist.svg
inst/extdata/output/fe_CG_rmsd_hist.csv
inst/extdata/output/co_CG_rmsd_hist.svg
inst/extdata/output/summary.csv
inst/extdata/output/ni_CG_hist.svg
inst/extdata/output/ni_CG_histo.csv
inst/extdata/output/co_CG_histo.csv
inst/extdata/fe_CG
inst/extdata/ni_CG
NAMESPACE
R
R/exponentialFitting.R
R/modygliani.R
R/MDA.R
R/statistics.R
R/doubExponentialFitting.R
R/loadStats.R
MD5
DESCRIPTION
man
man/modygliani.Rd
LICENSE
modygliani documentation built on May 20, 2017, 3:22 a.m.