monographaR: Taxonomic Monographs Tools
Version 1.2.0

Contains functions intended to facilitate the production of plant taxonomic monographs. The package includes functions to convert tables into taxonomic descriptions, lists of collectors, examined specimens, and can generate a monograph skeleton. Additionally, wrapper functions to batch the production of phenology charts and distributional and diversity maps are also available.

AuthorMarcelo Reginato
Date of publication2016-07-13 10:19:35
MaintainerMarcelo Reginato <reginatobio@yahoo.com.br>
LicenseGPL (>= 2)
Version1.2.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("monographaR")

Getting started

Package overview
A quick guide to monographaR"

Popular man pages

collectorList: Generates a collector list
examinedSpecimens: Generates an examined specimens list
mapPhenology: Phenology heatmap
monographaR_examples: Input data examples
monographaR-package: Tools for taxonomic monographs.
phenoHist: Circular histograms of phenology
tableToDescription: Generates species descriptions
See all...

All man pages Function index File listing

Man pages

buildMonograph: Build and export a monograph skeleton (draft)
collectorList: Generates a collector list
examinedSpecimens: Generates an examined specimens list
mapBatch: Generates map in batch mode
mapDiversity: Diversity heatmap
mapPhenology: Phenology heatmap
mapTable: Generates a presence/absence matrix of species on grids or...
monographaR_examples: Input data examples
monographaR-package: Tools for taxonomic monographs.
phenoHist: Circular histograms of phenology
tableToDescription: Generates species descriptions

Functions

buildMonograph Man page Source code
collectorList Man page Source code
collectorList2 Source code
examinedSpecimens Man page Source code
examinedSpecimens2 Source code
mapBatch Man page Source code
mapDiversity Man page Source code
mapPhenology Man page Source code
mapTable Man page Source code
monographaR Man page
monographaR-package Man page
monographaR_examples Man page
phenoHist Man page Source code
tableToDescription Man page Source code
tableToDescription2 Source code

Files

inst
inst/CITATION
inst/doc
inst/doc/tutorial.R
inst/doc/tutorial.html
inst/doc/tutorial.Rmd
NAMESPACE
data
data/monographaR_examples.rda
R
R/tableToDescription.R
R/phenoHist.R
R/mapDiversity.R
R/mapPhenology.R
R/examinedSpecimens.R
R/buildMonograph.R
R/examinedSpecimens2.R
R/mapBatch.R
R/tableToDescription2.R
R/collectorList.R
R/monographaR-internal.R
R/mapTable.R
R/collectorList2.R
vignettes
vignettes/tutorial.Rmd
MD5
build
build/vignette.rds
DESCRIPTION
man
man/tableToDescription.Rd
man/phenoHist.Rd
man/mapTable.Rd
man/monographaR_examples.Rd
man/examinedSpecimens.Rd
man/collectorList.Rd
man/monographaR-package.Rd
man/mapBatch.Rd
man/buildMonograph.Rd
man/mapDiversity.Rd
man/mapPhenology.Rd
monographaR documentation built on May 19, 2017, 10:23 p.m.

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