monographaR: Taxonomic Monographs Tools

Contains functions intended to facilitate the production of plant taxonomic monographs. The package includes functions to convert tables into taxonomic descriptions, lists of collectors, examined specimens, and can generate a monograph skeleton. Additionally, wrapper functions to batch the production of phenology charts and distributional and diversity maps are also available.

Author
Marcelo Reginato
Date of publication
2016-07-13 10:19:35
Maintainer
Marcelo Reginato <reginatobio@yahoo.com.br>
License
GPL (>= 2)
Version
1.2.0

View on CRAN

Man pages

buildMonograph
Build and export a monograph skeleton (draft)
collectorList
Generates a collector list
examinedSpecimens
Generates an examined specimens list
mapBatch
Generates map in batch mode
mapDiversity
Diversity heatmap
mapPhenology
Phenology heatmap
mapTable
Generates a presence/absence matrix of species on grids or...
monographaR_examples
Input data examples
monographaR-package
Tools for taxonomic monographs.
phenoHist
Circular histograms of phenology
tableToDescription
Generates species descriptions

Files in this package

monographaR
monographaR/inst
monographaR/inst/CITATION
monographaR/inst/doc
monographaR/inst/doc/tutorial.R
monographaR/inst/doc/tutorial.html
monographaR/inst/doc/tutorial.Rmd
monographaR/NAMESPACE
monographaR/data
monographaR/data/monographaR_examples.rda
monographaR/R
monographaR/R/tableToDescription.R
monographaR/R/phenoHist.R
monographaR/R/mapDiversity.R
monographaR/R/mapPhenology.R
monographaR/R/examinedSpecimens.R
monographaR/R/buildMonograph.R
monographaR/R/examinedSpecimens2.R
monographaR/R/mapBatch.R
monographaR/R/tableToDescription2.R
monographaR/R/collectorList.R
monographaR/R/monographaR-internal.R
monographaR/R/mapTable.R
monographaR/R/collectorList2.R
monographaR/vignettes
monographaR/vignettes/tutorial.Rmd
monographaR/MD5
monographaR/build
monographaR/build/vignette.rds
monographaR/DESCRIPTION
monographaR/man
monographaR/man/tableToDescription.Rd
monographaR/man/phenoHist.Rd
monographaR/man/mapTable.Rd
monographaR/man/monographaR_examples.Rd
monographaR/man/examinedSpecimens.Rd
monographaR/man/collectorList.Rd
monographaR/man/monographaR-package.Rd
monographaR/man/mapBatch.Rd
monographaR/man/buildMonograph.Rd
monographaR/man/mapDiversity.Rd
monographaR/man/mapPhenology.Rd