Files in monolix2rx

Converts 'Monolix' Models to 'rxode2'

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

LICENSE

R/aaaCranMonolix2rxThreads.R R/mlxtran.R R/fit.R R/dataImport.R R/dataImportBinary.R R/equation.R R/parameter.R R/mlxtranLib.R R/etaImport.R R/discreteEndpoint.R R/ind.R R/endpointInfo.R R/rxSolve.R R/task.R R/popDef.R R/monolix2rx.R R/longOut.R R/rxUiGetGen.R R/buildParser.R R/pk.R R/lixoftConnectors.R R/plot.R R/mlxtranJac.R R/dataCov.R R/mixture.R R/mlxtranOp.R R/def2ini.R R/latent.R R/fileinfo.R R/rxUiGet.R R/mlxtranTransformGetRxCode.R R/indDef.R R/longDef.R R/pk2rx.R R/zzz.R R/singleEndpoint.R R/imports.R R/mlxtranCov.R R/validate.R R/mlxtranChangeEquation.R R/parameterEta.R R/ipredImport.R R/parameterUpdate.R R/pkmodel2macro.R R/content.R R/dataSettings.R R/covEq.R R/summaryData.R R/long.R

src/mlxtranFileinfo.g.d_parser.h

src/mlxtranOp.c

src/mlxtranInd.g.d_parser.h

src/mlxtranParameter.g.d_parser.h

src/mlxtranContent.c

src/sbuf.c

src/longDef.g.d_parser.h

src/util.h

src/equation.c

src/mlxtranInd.c

src/mlxtranFit.g.d_parser.h

src/util.cpp

src/sbufTest.c

src/mlxtranParameter.c

src/mlxtranIndDefinition.c

src/equation.g.d_parser.h

src/strictAmbig.h

src/mlxtranFileinfo.c

src/mlxtranFit.c

src/longDef.c

src/init.c

src/mlxtranTask.c

src/summaryData.g.d_parser.h

src/shared.c

src/parseSyntaxErrors.h

src/longOutput.c

src/summaryData.c

src/mem.c

src/mlxtranTask.g.d_parser.h

src/mlxtranIndDefinition.g.d_parser.h

src/mlxtranOp.g.d_parser.h

src/dataSettings.g.d_parser.h

src/dataSettings.c

src/mlxtranContent.g.d_parser.h

src/longOutput.g.d_parser.h

inst/dataSettings.g

inst/longOutput.g

inst/mlxtranOp.g

inst/mlxtranInd.g

inst/equation.g

inst/mlxtranContent.g

inst/longDef.g

inst/mlxtranPk.g

inst/mlxtranParameter.g

inst/summaryData.g

inst/mlxtranIndDefinition.g

inst/mlxtranTask.g

inst/mlxtranFit.g

inst/mlxtranFileinfo.g

inst/theo/parent_metabolite_project.mlxtran

inst/theo/oral1_1cpt_kaVCl.txt

inst/theo/theophylline_project.mlxtran

inst/theo/oral1_noFPE_2cptP1cptM_uni_kaVkk12k21kmKpm.txt

inst/theo/pm/predictions_y2_Cm.txt

inst/theo/pm/populationParameters.txt

inst/theo/pm/summary.txt

inst/theo/pm/predictions_y1_Cp.txt

inst/theo/pm/Tests/symmetryResiduals.txt

inst/theo/pm/Tests/correlationRandomEffects.txt

inst/theo/pm/Tests/normalityIndividualParameters.txt

inst/theo/pm/Tests/normalityResiduals.txt

inst/theo/pm/Tests/normalityRandomEffects.txt

inst/theo/pm/LogLikelihood/logLikelihood.txt

inst/theo/pm/LogLikelihood/individualLL.txt

inst/theo/pm/FisherInformation/correlationEstimatesSA.txt

inst/theo/pm/FisherInformation/covarianceEstimatesSA.txt

inst/theo/pm/IndividualParameters/estimatedIndividualParameters.txt

inst/theo/pm/IndividualParameters/estimatedRandomEffects.txt

inst/theo/pm/IndividualParameters/simulatedIndividualParameters.txt

inst/theo/pm/IndividualParameters/simulatedRandomEffects.txt

inst/theo/data/parent_metabolite_data.csv

inst/theo/data/theophylline_data.txt

inst/theo/tp/populationParameters.txt

inst/theo/tp/summary.txt

inst/theo/tp/predictions.txt

inst/theo/tp/Tests/symmetryResiduals.txt

inst/theo/tp/Tests/correlationRandomEffects.txt

inst/theo/tp/Tests/normalityIndividualParameters.txt

inst/theo/tp/Tests/correlationRandomEffectsCovariates.txt

inst/theo/tp/Tests/normalityResiduals.txt

inst/theo/tp/Tests/normalityRandomEffects.txt

inst/theo/tp/ChartsData/ObservationsVsPredictions/CONC_visualGuides.txt

inst/theo/tp/ChartsData/ObservationsVsPredictions/CONC_obsVsSimulatedPred.txt

inst/theo/tp/ChartsData/ObservationsVsPredictions/CONC_obsVsPred.txt

inst/theo/tp/ChartsData/Saem/CvParam.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_simulatedResiduals.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_time_percentiles_npde.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_populationBins.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_prediction_percentiles_npde.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_individualBins.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_prediction_percentiles_pwRes.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_prediction_percentiles_iwRes.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_timeBins.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_time_percentiles_pwRes.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_time_percentiles_iwRes.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_residuals.txt

inst/theo/tp/ChartsData/ScatterPlotOfTheResiduals/CONC_spline.txt

inst/theo/tp/ChartsData/DistributionOfTheStandardizedRandomEffects/standardizedEta.txt

inst/theo/tp/ChartsData/DistributionOfTheStandardizedRandomEffects/cdf.txt

inst/theo/tp/ChartsData/DistributionOfTheStandardizedRandomEffects/pdf.txt

inst/theo/tp/ChartsData/DistributionOfTheResiduals/CONC_cdf.txt

inst/theo/tp/ChartsData/DistributionOfTheResiduals/theoreticalGuides.txt

inst/theo/tp/ChartsData/DistributionOfTheResiduals/CONC_pdf.txt

inst/theo/tp/ChartsData/DistributionOfTheIndividualParameters/cdf.txt

inst/theo/tp/ChartsData/DistributionOfTheIndividualParameters/visualGuides.txt

inst/theo/tp/ChartsData/DistributionOfTheIndividualParameters/pdf.txt

inst/theo/tp/ChartsData/IndividualParametersVsCovariates/visualGuides.txt

inst/theo/tp/ChartsData/IndividualParametersVsCovariates/covariates.txt

inst/theo/tp/ChartsData/IndividualParametersVsCovariates/simulatedCovariates.txt

inst/theo/tp/ChartsData/IndividualFits/CONC_fits.txt

inst/theo/tp/ChartsData/IndividualFits/CONC_observations.txt

inst/theo/tp/ChartsData/CorrelationBetweenRandomEffects/simulatedEta.txt

inst/theo/tp/ChartsData/CorrelationBetweenRandomEffects/visualGuides.txt

inst/theo/tp/ChartsData/CorrelationBetweenRandomEffects/eta.txt

inst/theo/tp/ChartsData/VisualPredictiveCheck/CONC_percentiles.txt

inst/theo/tp/ChartsData/VisualPredictiveCheck/CONC_observations.txt

inst/theo/tp/ChartsData/VisualPredictiveCheck/CONC_bins.txt

inst/theo/tp/LogLikelihood/logLikelihood.txt

inst/theo/tp/LogLikelihood/individualLL.txt

inst/theo/tp/FisherInformation/correlationEstimatesLin.txt

inst/theo/tp/FisherInformation/covarianceEstimatesLin.txt

inst/theo/tp/IndividualParameters/estimatedIndividualParameters.txt

inst/theo/tp/IndividualParameters/estimatedRandomEffects.txt

inst/theo/tp/IndividualParameters/simulatedIndividualParameters.txt

inst/theo/tp/IndividualParameters/simulatedRandomEffects.txt

inst/stress/run-stress.R inst/stress/README.md inst/stress/PLAN.md inst/stress/stress.R inst/stress/mock/fake-monolix.R inst/stress/R/mlxtran.R inst/stress/R/main.R inst/stress/R/monolix.R inst/stress/R/data.R inst/stress/R/report.R inst/stress/R/run.R inst/stress/R/case.R inst/stress/R/import.R inst/stress/R/sim.R inst/stress/R/stress-kit.R inst/stress/bin/run-lixoft.R inst/stress/cases/30-dose-keywords.R inst/stress/cases/22-spelling.R inst/stress/cases/26-functions.R inst/stress/cases/13-covariates.R inst/stress/cases/28-start-events.R inst/stress/cases/39-map-priors.R inst/stress/cases/23-data-records.R inst/stress/cases/08-dde.R inst/stress/cases/01-pk.R inst/stress/cases/19-data-layout.R inst/stress/cases/18-syntax.R inst/stress/cases/29-start-rem.R inst/stress/cases/05-params.R inst/stress/cases/04-data.R inst/stress/cases/09-mixture.R inst/stress/cases/16-dosing.R inst/stress/cases/17-error-output.R inst/stress/cases/15-individual.R inst/stress/cases/27-covariate-data.R inst/stress/cases/31-spellings-odes.R inst/stress/cases/34-monolix-probes.R inst/stress/cases/03-dosing.R inst/stress/cases/06-error.R inst/stress/cases/14-pk-macros.R inst/stress/cases/21-individual.R inst/stress/cases/11-special.R inst/stress/cases/00-common.R inst/stress/cases/33-infusions-ids.R inst/stress/cases/20-covariates.R inst/stress/cases/40-map-shapes.R inst/stress/cases/32-macros-outputs.R inst/stress/cases/35-run-probes.R inst/stress/cases/10-iov.R inst/stress/cases/36-space-infusions.R inst/stress/cases/25-error-models.R inst/stress/cases/07-tasks.R inst/stress/cases/02-ode.R inst/stress/cases/38-data-text.R inst/stress/cases/37-data-format.R inst/stress/cases/12-tte.R inst/stress/cases/24-macros.R

inst/cov/oral1_1cpt_TlagkaVCl.txt

inst/cov/phenobarbital_project.mlxtran

inst/cov/warfarin_covariate1_project.mlxtran

inst/cov/warfarin_covariate3_project.mlxtran

inst/cov/bolus_1cpt_Vk.txt

inst/cov/warfarin_covariate2_project.mlxtran

inst/cov/w2/populationParameters.txt

inst/cov/w2/summary.txt

inst/cov/w2/predictions.txt

inst/cov/w2/Tests/symmetryResiduals.txt

inst/cov/w2/Tests/correlationRandomEffects.txt

inst/cov/w2/Tests/normalityIndividualParameters.txt

inst/cov/w2/Tests/correlationIndividualParametersCovariates.txt

inst/cov/w2/Tests/correlationRandomEffectsCovariates.txt

inst/cov/w2/Tests/fixedEffects.txt

inst/cov/w2/Tests/normalityResiduals.txt

inst/cov/w2/Tests/normalityRandomEffects.txt

inst/cov/w2/LogLikelihood/logLikelihood.txt

inst/cov/w2/LogLikelihood/individualLL.txt

inst/cov/w2/FisherInformation/correlationEstimatesLin.txt

inst/cov/w2/FisherInformation/covarianceEstimatesLin.txt

inst/cov/w2/IndividualParameters/estimatedIndividualParameters.txt

inst/cov/w2/IndividualParameters/estimatedRandomEffects.txt

inst/cov/w2/IndividualParameters/simulatedIndividualParameters.txt

inst/cov/w2/IndividualParameters/simulatedRandomEffects.txt

inst/cov/pb/populationParameters.txt

inst/cov/pb/summary.txt

inst/cov/pb/predictions.txt

inst/cov/pb/Tests/symmetryResiduals.txt

inst/cov/pb/Tests/correlationRandomEffects.txt

inst/cov/pb/Tests/normalityIndividualParameters.txt

inst/cov/pb/Tests/correlationIndividualParametersCovariates.txt

inst/cov/pb/Tests/correlationRandomEffectsCovariates.txt

inst/cov/pb/Tests/fixedEffects.txt

inst/cov/pb/Tests/normalityResiduals.txt

inst/cov/pb/Tests/normalityRandomEffects.txt

inst/cov/pb/LogLikelihood/logLikelihood.txt

inst/cov/pb/LogLikelihood/individualLL.txt

inst/cov/pb/FisherInformation/correlationEstimatesSA.txt

inst/cov/pb/FisherInformation/covarianceEstimatesSA.txt

inst/cov/pb/IndividualParameters/estimatedIndividualParameters.txt

inst/cov/pb/IndividualParameters/estimatedRandomEffects.txt

inst/cov/pb/IndividualParameters/simulatedIndividualParameters.txt

inst/cov/pb/IndividualParameters/simulatedRandomEffects.txt

inst/cov/w1/populationParameters.txt

inst/cov/w1/summary.txt

inst/cov/w1/predictions.txt

inst/cov/w1/Tests/symmetryResiduals.txt

inst/cov/w1/Tests/correlationRandomEffects.txt

inst/cov/w1/Tests/normalityIndividualParameters.txt

inst/cov/w1/Tests/correlationRandomEffectsCovariates.txt

inst/cov/w1/Tests/normalityResiduals.txt

inst/cov/w1/Tests/normalityRandomEffects.txt

inst/cov/w1/LogLikelihood/logLikelihood.txt

inst/cov/w1/LogLikelihood/individualLL.txt

inst/cov/w1/FisherInformation/correlationEstimatesSA.txt

inst/cov/w1/FisherInformation/covarianceEstimatesSA.txt

inst/cov/w1/IndividualParameters/estimatedIndividualParameters.txt

inst/cov/w1/IndividualParameters/estimatedRandomEffects.txt

inst/cov/w1/IndividualParameters/simulatedIndividualParameters.txt

inst/cov/w1/IndividualParameters/simulatedRandomEffects.txt

inst/cov/data/phenobarbital_data.csv

inst/cov/data/warfarin_data.csv

inst/cov/w3/populationParameters.txt

inst/cov/w3/summary.txt

inst/cov/w3/predictions.txt

inst/cov/w3/Tests/symmetryResiduals.txt

inst/cov/w3/Tests/correlationRandomEffects.txt

inst/cov/w3/Tests/normalityIndividualParameters.txt

inst/cov/w3/Tests/correlationIndividualParametersCovariates.txt

inst/cov/w3/Tests/correlationRandomEffectsCovariates.txt

inst/cov/w3/Tests/fixedEffects.txt

inst/cov/w3/Tests/normalityResiduals.txt

inst/cov/w3/Tests/normalityRandomEffects.txt

inst/cov/w3/LogLikelihood/logLikelihood.txt

inst/cov/w3/LogLikelihood/individualLL.txt

inst/cov/w3/FisherInformation/correlationEstimatesSA.txt

inst/cov/w3/FisherInformation/covarianceEstimatesSA.txt

inst/cov/w3/IndividualParameters/estimatedIndividualParameters.txt

inst/cov/w3/IndividualParameters/estimatedRandomEffects.txt

inst/cov/w3/IndividualParameters/simulatedIndividualParameters.txt

inst/cov/w3/IndividualParameters/simulatedRandomEffects.txt

tests/testthat.R tests/testthat/test-mem-sbuf-overflow.R tests/testthat/test-data-import.R tests/testthat/test-data-load.R tests/testthat/test-etaImport.R tests/testthat/test-ind-def.R tests/testthat/test-fileinfo.R tests/testthat/test-memory-safety.R tests/testthat/test-validate-cens.R tests/testthat/test-latent.R tests/testthat/test-mem-dparse-int-cast.R tests/testthat/test-def2ini.R tests/testthat/test-ambiguity.R tests/testthat/setup-strict-ambiguity.R tests/testthat/test-fit.R tests/testthat/test-stress.R tests/testthat/test-discrete.R tests/testthat/test-library.R tests/testthat/test-content.R tests/testthat/test-demos.R tests/testthat/test-longDef.R tests/testthat/test-rxsolve.R tests/testthat/test-regressor.R tests/testthat/test-popDef.R tests/testthat/test-parameterUpdate-dataImport.R tests/testthat/test-longOut.R tests/testthat/test-task.R tests/testthat/test-longitudinal.R tests/testthat/test-dirn.R tests/testthat/test-data-binary.R tests/testthat/test-covTransform.R tests/testthat/test-equation.R tests/testthat/test-lixoft.R tests/testthat/test-mlxtranOp.R tests/testthat/test-pk2rx.R tests/testthat/test-parameter.R tests/testthat/test-jac.R tests/testthat/test-mixture.R tests/testthat/test-mlxtran.R tests/testthat/test-pkmodel.R tests/testthat/test-singleEndpoint.R tests/testthat/test-thetaMat.R tests/testthat/test-dataSettings.R tests/testthat/test-mem-rc-dup-str.R tests/testthat/test-pk.R tests/testthat/test-ind.R tests/testthat/_snaps/task.md tests/testthat/_snaps/ind-def.md tests/testthat/_snaps/mlxtran.md tests/testthat/_snaps/dataSettings.md tests/testthat/_snaps/longOut.md tests/testthat/_snaps/ind.md tests/testthat/_snaps/fit.md tests/testthat/_snaps/parameter.md tests/testthat/_snaps/fileinfo.md tests/testthat/_snaps/content.md tests/testthat/_snaps/mlxtranOp.md tests/testthat/_snaps/longDef.md tests/testthat/_snaps/longitudinal.md

tests/testthat/_snaps/data-import/single-endpoint-theo-pall.svg

tests/testthat/_snaps/data-import/single-endpoint-theo-p1.svg

tests/testthat/_snaps/data-import/multiple-endpoint-theo.svg

tests/testthat/_snaps/data-import/multiple-endpoint-theo-pall.svg

tests/testthat/_snaps/data-import/single-endpoint-theo.svg

tests/testthat/_snaps/data-import/multiple-endpoint-theo-p1.svg

man/monolix2rx.Rd man/dot-getStiff.Rd man/autoplot.monolix2rx.Rd man/dot-getSsLimits.Rd man/mlxtran.Rd man/dot-getNbdoses.Rd man/mlxTxt.Rd man/dot-monolixGetMlxtran.Rd man/aaaCranMonolix2rxThreads.Rd

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monolix2rx documentation built on Nov. 7, 2026, 1:07 a.m.