moveplot3 | R Documentation |
Create animated biplot on samples and variables in a biplot with a given target
moveplot3(
bp,
time.var,
group.var,
move = TRUE,
hulls = TRUE,
scale.var = 5,
target = NULL
)
bp |
biplot object from biplotEZ |
time.var |
time variable |
group.var |
group variable |
move |
whether to animate (TRUE) or facet (FALSE) samples and variables, according to time.var |
hulls |
whether to display sample points or convex hulls |
scale.var |
scaling the vectors representing the variables |
target |
Target data set to which all biplots should be matched consisting of the the same dimensions. If not specified, the centroid of all available biplot sample coordinates from |
bp |
Returns the elements of the biplot object |
iter_levels |
The levels of the time variable. |
coord_set |
The coordinates of the configurations before applying Generalised Orthogonal Procrustes Analysis. |
GPA_list |
The coordinates of the configurations after applying Generalised Orthogonal Procrustes Analysis. |
plot |
An animated or a facet of biplots based on the dynamic frame. |
data(Africa_climate)
data(Africa_climate_target)
bp <- biplotEZ::biplot(Africa_climate, scaled = TRUE) |> biplotEZ::PCA()
bp |> moveplot3(time.var = "Year", group.var = "Region", hulls = TRUE,
move = FALSE, target = NULL)
if(interactive()) {
bp |> moveplot3(time.var = "Year", group.var = "Region", hulls = TRUE,
move = TRUE, target = NULL)}
bp |> moveplot3(time.var = "Year", group.var = "Region", hulls = TRUE,
move = FALSE, target = Africa_climate_target)
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