get_similar_ions: Get similar ion groups.

In mpactr: Correction of Preprocessed MS Data

Get similar ion groups.

Description

get_similar_ions() is a wrapper function to return similar ion groups determined with the filter_mispicked_ions().

Usage

get_similar_ions(mpactr_object)

Arguments

mpactr_object

The mpactr object that is created by calling the import_data() function.

Value

a data.table reporting the main ion and those found to be similar with filter_mispicked_ions().

Examples

data <- import_data(
  example_path("coculture_peak_table.csv"),
  example_path("metadata.csv"),
  format = "Progenesis"
)

data_filter <- filter_mispicked_ions(data)

mispicked_ion_groups <- get_similar_ions(data_filter)
mispicked_ion_groups

mpactr documentation built on April 3, 2025, 6:19 p.m.