mph: Multiscale persistent homology

A fast approach to compute approximate persistent homology using a multiscale approach

Install the latest version of this package by entering the following in R:
install.packages("mph")
AuthorSamuel Gerber <sgerber@math.duke.edu>
Date of publication2014-01-15 12:32:33
MaintainerSamuel Gerber <sgerber@math.duke.edu>
LicenseGPL-2
Version0.9

View on CRAN

Functions

multiscale.rips.ipca Man page

Files

src
src/Makevars
src/GMRANeighborhood.h
src/Simplex.h
src/GWT.h
src/PotentialGMRANeighborhood.h
src/DenseMatrix.h
src/NodeDistance.h
src/LapackDefs.h
src/IPCATree.h
src/RelativeSubspaceSimilarity.h
src/mph.cc
src/Matrix.h
src/SquaredEuclideanMetric.h
src/HierarchicalLPDistance.h
src/EuclideanMetric.h
src/LPDistance.h
src/Linalg.h
src/GMRAMultiscaleTransport.h
src/RandomRange.h
src/RandomSVD.h
src/MultiscaleMappingRips.h
src/Wasserstein.h
src/WassersteinTreeDistance.h
src/GrassmannianNodeSimilarity.h
src/RigidPatchSimilarity.h
src/MappingRips2.h
src/MappingRips.h
src/DenseVector.h
src/Metric.h
src/Random.h
src/IPCAGWT.h
src/WassersteinSimilarity.h
src/PlaneAngles.h
src/RelativeGMRANeighborhood.h
src/LinalgIO.h
src/Makevars.win
src/SVD.h
src/GMRATree.h
src/Vector.h
src/CompressGWT.h
src/MappingPersistentHomology.h
src/CoverTree.h
src/SimilarityVisitor.h
src/IteratedMDSTree.h
src/RelativeOrientationSimilarity.h
src/NodeMapVisitor.h
NAMESPACE
R
R/multiscale.rips.R R/perf.tests.R
MD5
README
DESCRIPTION
ChangeLog
man
man/multiscale.rips.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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