mpmi: Mixed-Pair Mutual Information Estimators

Uses a kernel smoothing approach to calculate Mutual Information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Uses a nonparametric bias correction giving Bias Corrected Mutual Information (BCMI). Implemented efficiently in Fortran 95 with OpenMP and suited to large genomic datasets.

Install the latest version of this package by entering the following in R:
install.packages("mpmi")
AuthorChris Pardy
Date of publication2016-11-20 16:40:03
MaintainerChris Pardy <cooliomcdude@gmail.com>
LicenseGPL-3
Version0.42
http://r-forge.r-project.org/projects/mpmi/

View on CRAN

Files

COPYING
inst
inst/doc
inst/doc/Vignette.Rnw
inst/doc/Vignette.R
inst/doc/Vignette.pdf
src
src/mminjk.f95
src/Makevars
src/mmi.f95
src/dmi.f95
src/nawrap.c
src/cminjk.f95
src/cmi.f95
src/10iface.f95
NAMESPACE
NEWS
data
data/mpmidata.RData
R
R/mmi.R R/cminjk.R R/dpikSafe.R R/mp.R R/dmif.R R/cmi.R R/mminjk.R
vignettes
vignettes/Vignette.Rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/mp.Rd man/dmi.Rd man/disc.Rd man/cts.Rd man/mmi.Rd man/cmi.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.