mpmi: Mixed-Pair Mutual Information Estimators

Uses a kernel smoothing approach to calculate Mutual Information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Uses a nonparametric bias correction giving Bias Corrected Mutual Information (BCMI). Implemented efficiently in Fortran 95 with OpenMP and suited to large genomic datasets.

AuthorChris Pardy
Date of publication2016-11-20 16:40:03
MaintainerChris Pardy <cooliomcdude@gmail.com>
LicenseGPL-3
Version0.42
http://r-forge.r-project.org/projects/mpmi/

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Files in this package

mpmi
mpmi/COPYING
mpmi/inst
mpmi/inst/doc
mpmi/inst/doc/Vignette.Rnw
mpmi/inst/doc/Vignette.R
mpmi/inst/doc/Vignette.pdf
mpmi/src
mpmi/src/mminjk.f95
mpmi/src/Makevars
mpmi/src/mmi.f95
mpmi/src/dmi.f95
mpmi/src/nawrap.c
mpmi/src/cminjk.f95
mpmi/src/cmi.f95
mpmi/src/10iface.f95
mpmi/NAMESPACE
mpmi/NEWS
mpmi/data
mpmi/data/mpmidata.RData
mpmi/R
mpmi/R/mmi.R mpmi/R/cminjk.R mpmi/R/dpikSafe.R mpmi/R/mp.R mpmi/R/dmif.R mpmi/R/cmi.R mpmi/R/mminjk.R
mpmi/vignettes
mpmi/vignettes/Vignette.Rnw
mpmi/MD5
mpmi/build
mpmi/build/vignette.rds
mpmi/DESCRIPTION
mpmi/man
mpmi/man/mp.Rd mpmi/man/dmi.Rd mpmi/man/disc.Rd mpmi/man/cts.Rd mpmi/man/mmi.Rd mpmi/man/cmi.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.