sample_data: Sample Data for the msarc Package

In msarc: Draw Diagrams (mis)Representing the Results of Mass Spec Experiments

Description

These two mass spec data sets are the experiment and control results from a mass spec of a GREB1 ChIP (sample_df) and an IgG ChIP (control_df).

Usage

data(sample_df)
data(control_df)

Format

Data frames with the following 3 columns:

uniprot

the UniProt ID of the protein

id

the symbolic name of the protein

score

the MASCOT score of the protein

Source

From Mohammed, H., D'Santos, C., Serandour, A. A., Ali, H. R., Brown, G. D., Atkins, A., et al. (2013). Endogenous Purification Reveals GREB1 as a Key Estrogen Receptor Regulatory Factor. Cell reports, 3(2), 342-349. doi:10.1016/j.celrep.2013.01.010

Examples

data(sample_df,package="msarc")
data(control_df,package="msarc")

msarc documentation built on May 30, 2017, 12:53 a.m.