mtk: Mexico ToolKit library (MTK)

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MTK (Mexico ToolKit) is a generic platform for the sensitivity and uncertainty analysis of complex models. It provides functions and facilities for experimental design, model simulation, sensitivity and uncertainty analysis, methods integration and data reporting, etc.

Author
Juhui WANG [aut, cre] (Software and Engineering), Hervé MONOD [aut] (Applications and Statistical Methods), Robert FAIVRE [ctb] (Applications and Statistical Methods), Hervé RICHARD [ctb] (Software and Engineering)
Date of publication
2014-07-24 13:12:50
Maintainer
Juhui WANG <Juhui.Wang@jouy.inra.fr>
License
GPL-3
Version
1.0

View on CRAN

Man pages

addProcess-methods
The 'addProcess' method
ANY
The ANY class
BasicMonteCarlo
The 'BasicMonteCarlo' design method
deleteProcess-methods
The 'deleteProcess' method
extractData-methods
The 'extractData' method
Fast
The extended Fourier Amplitude Sensitivity Test for...
getData-methods
The 'getData' method
getDiscreteDistributionLevels-methods
The 'getDiscreteDistributionLevels' method
getDiscreteDistributionType-methods
The 'getDiscreteDistributionType' method
getDiscreteDistributionWeights-methods
The 'getDiscreteDistributionWeights' method
getDistributionName-methods
The 'getDistributionName' method
getDistributionNames-methods
The 'getDistributionNames' method
getDistributionNominalValue-methods
The 'getDistributionNominalValue' method
getDistributionNominalValues-methods
The 'getDistributionNominalValues' method
getDistributionNominalValueType-methods
The 'getDistributionNominalValueType' method
getDistributionNominalValueTypes-methods
The 'getDistributionNominalValueTypes' method
getDistributionParameters-methods
The 'getDistributionParameters' method
getDomainFactor-methods
The 'getDomain' method
getFactorFeatures-methods
The 'getFactorFeatures' method
getFactorNames-methods
The 'getFactorNames' method
getFactors-methods
The 'getFactors' method
getFeatures-methods
The 'getFeatures' method
getLevels-methods
The 'getLevels' method
getMTKFeatures-methods
The 'getMTKFeatures' method
getName-methods
The 'getName' method
getNames-methods
The 'getNames' method
getNominalValue-methods
The 'getNominalValue' method
getNominalValueType-methods
The 'getNominalValueType' method
getParameters-methods
The 'getParameters' method
getProcess-methods
The 'getProcess' method
getResult-methods
The 'getResult' method
getType-methods
The 'getType' method
getValue-methods
The 'getValue' method
getWeights-methods
The 'getWeights' method
is.finished-methods
The 'is.finished' method
Ishigami
The 'Ishigami' model
Ishigami.factors
Input factors of the 'Ishigami' model
is.ready-methods
The 'is.ready' method
make.mtkFactor
The 'make.mtkFactor' function
make.mtkFeatureList
The 'make.mtkFeatureList' function
make.mtkParameterList
The 'make.mtkParameterList' function
Morris
The 'Morris' method
mtkAnalyser
The constructor of the class 'mtkAnalyser'
mtk.analyserAddons
The 'mtk.analyserAddons' function
mtkAnalyser-class
The 'mtkAnalyser' class
mtkAnalyserResult
The constructor of the class 'mtkAnalyserResult'
mtkAnalyserResult-class
The 'mtkAnalyserResult' class
mtkBasicMonteCarloDesigner
The constructor of the class 'mtkBasicMonteCarloDesigner'
mtkBasicMonteCarloDesigner-class
The 'mtkBasicMonteCarloDesigner' class
mtkBasicMonteCarloDesignerResult
The constructor of class 'mtkBasicMonteCarloDesignerResult'
mtkBasicMonteCarloDesignerResult-class
The 'mtkBasicMonteCarloDesignerResult' class
mtkDefaultAnalyser
The constructor of the class 'mtkDefaultAnalyser'
mtkDefaultAnalyser-class
The 'mtkDefaultAnalyser' class
mtkDesigner
The constructor of the class 'mtkDesigner'
mtk.designerAddons
The 'mtk.designerAddons' function
mtkDesigner-class
The 'mtkDesigner' class
mtkDesignerResult
The constructor of the class 'mtkDesignerResult'
mtkDesignerResult-class
The 'mtkDesignerResult' class
mtkDomain
The constructor of the class 'mtkDomain'
mtkDomain-class
The 'mtkDomain' class
mtkEvaluator
The constructor of the class 'mtkEvaluator'
mtk.evaluatorAddons
The 'mtk.evaluatorAddons' function
mtkEvaluator-class
The 'mtkEvaluator' class
mtkEvaluatorResult
The constructor of the class 'mtkEvaluatorResult'
mtkEvaluatorResult-class
The 'mtkEvaluatorResult' class
mtkExperiment
The constructor of the class 'mtkExperiment'
mtkExperiment-class
The 'mtkExperiment' class
mtkExpFactors
The constructor of the class 'mtkExpFactors'
mtkExpFactors-class
The 'mtkExpFactors' class
mtkExpWorkflow
The constructor of the class 'mtkExpWorkflow'
mtkExpWorkflow-class
The 'mtkExpWorkflow' class
mtkFactor
The constructor of the class 'mtkFactor'
mtkFactor-class
The 'mtkFactor' class
mtkFastAnalyser
The constructor of the class 'mtkFastAnalyser'
mtkFastAnalyser-class
The 'mtkFastAnalyser' class
mtkFastAnalyserResult
The constructor of the class 'mtkFastAnalyserResult'
mtkFastAnalyserResult-class
The 'mtkFastAnalyserResult' class
mtkFastDesigner
The constructor of the class 'mtkFastDesigner'
mtkFastDesigner-class
The 'mtkFastDesigner' class
mtkFastDesignerResult
The constructor of the class 'mtkFastDesignerResult'
mtkFastDesignerResult-class
The 'mtkFastDesignerResult' class
mtkFeature
The constructor of the class 'mtkFeature'
mtkFeature-class
The 'mtkFeature' class
mtkIshigamiEvaluator
The constructor of the class 'mtkIshigamiEvaluator'
mtkIshigamiEvaluator-class
The 'mtkIshigamiEvaluator' class
mtkLevels
The constructor of the class 'mtkLevels'
mtkLevels-class
The 'mtkLevels' class
mtkMorrisAnalyser
The constructor of the class 'mtkMorrisAnalyser'
mtkMorrisAnalyser-class
The 'mtkMorrisAnalyser' class
mtkMorrisAnalyserResult
The constructor of the class 'mtkMorrisAnalyserResult'
mtkMorrisAnalyserResult-class
The 'mtkMorrisAnalyserResult' class
mtkMorrisDesigner
The constructor of the class 'mtkMorrisDesigner'
mtkMorrisDesigner-class
The 'mtkMorrisDesigner' class
mtkMorrisDesignerResult
The constructor of the class 'mtkMorrisDesignerResult'
mtkMorrisDesignerResult-class
The 'mtkMorrisDesignerResult' class
mtkNativeAnalyser
The constructor of the class 'mtkNativeAnalyser'
mtkNativeAnalyser-class
The 'mtkNativeAnalyser' class
mtkNativeDesigner
The constructor of the class 'mtkNativeDesigner'
mtkNativeDesigner-class
The 'mtkNativeDesigner' class
mtkNativeEvaluator
The constructor of the class 'mtkNativeEvaluator'
mtkNativeEvaluator-class
The 'mtkNativeEvaluator' class
mtk-package
MTK (Mexico ToolKit) for Sensitivity Analysis and Numerical...
mtkParameter
The constructor of the class 'mtkParameter'
mtkParameter-class
The 'mtkParameter' class
mtkParsor
The constructor of the class 'mtkParsor'
mtkParsor-class
The 'mtkParsor' class
mtkPLMMAnalyser
The constructor of the class 'mtkPLMMAnalyser'
mtkPLMMAnalyser-class
The 'mtkPLMMAnalyser' class
mtkPLMMAnalyserResult
The constructor of the class 'mtkPLMMAnalyserResult'
mtkPLMMAnalyserResult-class
The 'mtkPLMMAnalyserResult' class
mtkProcess
The constructor of the 'mtkProcess' class
mtkProcess-class
The 'mtkProcess' class
mtkRandLHSDesigner
The constructor of the class 'mtkRandLHSDesigner'
mtkRandLHSDesigner-class
The 'mtkRandLHSDesigner' class
mtkRandLHSDesignerResult
The constructor of the class 'mtkRandLHSDesignerResult'
mtkRandLHSDesignerResult-class
The 'mtkRandLHSDesignerResult' class
mtkReadFactors-methods
The 'mtkReadFactor' method
mtkRegressionAnalyser
The constructor of the class 'mtkRegressionAnalyser'
mtkRegressionAnalyser-class
The 'mtkRegressionAnalyser' class
mtkRegressionAnalyserResult
The constructor of the class 'mtkRegressionAnalyserResult'
mtkRegressionAnalyserResult-class
The 'mtkRegressionAnalyserResult' class
mtkResult
The constructor of the class 'mtkResult'
mtkResult-class
The 'mtkResult' class
mtkSobolAnalyser
The constructor of the class 'mtkSobolAnalyser'
mtkSobolAnalyser-class
The 'mtkSobolAnalyser' class
mtkSobolAnalyserResult
The constructor of the class 'mtkSobolAnalyserResult'
mtkSobolAnalyserResult-class
The 'mtkSobolAnalyserResult' class
mtkSobolDesigner
The constructor of the class 'mtkSobolDesigner'
mtkSobolDesigner-class
The 'mtkSobolDesigner' class
mtkSobolDesignerResult
The constructor of the class 'mtkSobolDesignerResult'
mtkSobolDesignerResult-class
The 'mtkSobolDesignerResult' class
mtkSystemEvaluator
The constructor of the class 'mtkSystemEvaluator'
mtkSystemEvaluator-class
The 'mtkSystemEvaluator' class
mtkSystemEvaluatorResult
The constructor of the class 'mtkSystemEvaluatorResult'
mtkSystemEvaluatorResult-class
The 'mtkSystemEvaluatorResult' class
mtkValue
The constructor of the class 'mtkValue'
mtkValue-class
The 'mtkValue' class
mtkWWDMEvaluator
The constructor of the class 'mtkWWDMEvaluator'
mtkWWDMEvaluator-class
The 'mtkWWDMEvaluator' class
mtkWWDMEvaluatorResult
The constructor of the class 'mtkWWDMEvaluatorResult'
mtkWWDMEvaluatorResult-class
The 'mtkWWDMEvaluatorResult' class
PLMM
The 'PLMM' method for sensitivity analysis
plot,mtkProcess-method
The 'plot' method
print,mtkProcess-method
The 'print' method
Quantiles
The 'Quantiles' function
RandLHS
The 'RandLHS' Method
reevaluate-methods
The 'reevaluate' method
Regression
The 'Regression' Method
report-methods
The 'report' method
run-methods
The 'run' method
serialize-methods
The 'serializeOn' method
setDistributionParameters-methods
The 'setDistributionParameters' method
setDomain-methods
The 'setDomain' method
setFactors-methods
The 'setFactors' method
setFeatures-methods
The 'setFeatures' method
setLevels-methods
The 'setLevels' method
setName-methods
The 'setName' method
setParameters-methods
The 'setParameters' method
setProcess-methods
The 'setProcess' method
setReady-methods
The 'setReady' method
setState-methods
The 'setState' method
setType-methods
The 'setType' method
setValue-methods
The 'setValue' method
setWeights-methods
The 'setWeights' method
setXMLFilePath-methods
The 'setXMLFilePath' function
Sobol
The 'Sobol' Method
summary,mtkProcess-method
The 'summary' method
WWDM
The 'WWDM' model
WWDM.climates
Dataset used with the 'WWDM' model
WWDM.factors
The input factors of the 'WWDM' model

Files in this package

mtk
mtk/inst
mtk/inst/manual
mtk/inst/manual/mtk-manual.pdf
mtk/inst/extdata
mtk/inst/extdata/ishigami_factors.csv
mtk/inst/extdata/scrapie_regularfraction_3.xml
mtk/inst/extdata/scarpie_regularfraction_3.csv
mtk/inst/extdata/regressionSI.R
mtk/inst/extdata/ishigami_fast.xml
mtk/inst/extdata/scrapie_factors.csv
mtk/inst/extdata/ishigami_morris.xml
mtk/inst/extdata/scrapie_regularfraction.xml
mtk/inst/extdata/montecarloDesigner.R
mtk/inst/extdata/wwdm.R
mtk/inst/extdata/WWDM_morris.xml
mtk/NAMESPACE
mtk/demo
mtk/demo/demo1.R
mtk/demo/demo2.R
mtk/demo/demo3.R
mtk/demo/00Index
mtk/data
mtk/data/Ishigami.factors.RData
mtk/data/wwdm.climates.RData
mtk/data/WWDM.factors.RData
mtk/R
mtk/R/mtkResult.R
mtk/R/mtkDefaultAnalyser.R
mtk/R/mtkFastAnalyser.R
mtk/R/mtkProcess.R
mtk/R/mtkMorrisDesigner.R
mtk/R/mtkNativeDesigner.R
mtk/R/mtkEvaluator.R
mtk/R/mtkAnalyserResult.R
mtk/R/mtkNativeEvaluator.R
mtk/R/mtkDesignerResult.R
mtk/R/mtkFactor.R
mtk/R/mtkParsor.R
mtk/R/mtkValue.R
mtk/R/mtkExperiment.R
mtk/R/mtkPackage.R
mtk/R/mtkSobolAnalyser.R
mtk/R/mtkFastDesigner.R
mtk/R/mtkIshigamiEvaluator.R
mtk/R/mtkEvaluatorResult.R
mtk/R/mtkExpFactors.R
mtk/R/mtkAllGenerics.R
mtk/R/mtkPLMMAnalyser.R
mtk/R/mtkSystemEvaluator.R
mtk/R/mtkWWDMEvaluator.R
mtk/R/mtkAnalyser.R
mtk/R/mtkDomain.R
mtk/R/mtk.addons.R
mtk/R/mtkSystemEvaluatorResult.R
mtk/R/mtkRegressionAnalyser.R
mtk/R/mtkLevels.R
mtk/R/mtkNativeAnalyser.R
mtk/R/globalsMtkFuncts.R
mtk/R/mtkFeature.R
mtk/R/mtkExpWorkflow.R
mtk/R/mtkParameter.R
mtk/R/mtkBasicMonteCarloDesigner.R
mtk/R/mtkMorrisAnalyser.R
mtk/R/mtkSobolDesigner.R
mtk/R/mtkRandLHSDesigner.R
mtk/R/mtkDesigner.R
mtk/MD5
mtk/DESCRIPTION
mtk/man
mtk/man/mtkReadFactors-methods.Rd
mtk/man/getFeatures-methods.Rd
mtk/man/is.finished-methods.Rd
mtk/man/print,mtkProcess-method.Rd
mtk/man/setValue-methods.Rd
mtk/man/reevaluate-methods.Rd
mtk/man/mtkRandLHSDesignerResult-class.Rd
mtk/man/getType-methods.Rd
mtk/man/mtkResult.Rd
mtk/man/getResult-methods.Rd
mtk/man/mtkParameter.Rd
mtk/man/getDistributionNominalValue-methods.Rd
mtk/man/mtkFeature-class.Rd
mtk/man/mtkFastAnalyser-class.Rd
mtk/man/mtkFactor-class.Rd
mtk/man/mtkSobolDesignerResult-class.Rd
mtk/man/mtkWWDMEvaluator.Rd
mtk/man/WWDM.Rd
mtk/man/addProcess-methods.Rd
mtk/man/mtkEvaluatorResult-class.Rd
mtk/man/mtkSystemEvaluatorResult.Rd
mtk/man/getLevels-methods.Rd
mtk/man/getDiscreteDistributionLevels-methods.Rd
mtk/man/serialize-methods.Rd
mtk/man/mtkNativeAnalyser-class.Rd
mtk/man/getFactors-methods.Rd
mtk/man/getDistributionNames-methods.Rd
mtk/man/BasicMonteCarlo.Rd
mtk/man/mtkSobolAnalyser-class.Rd
mtk/man/getDiscreteDistributionType-methods.Rd
mtk/man/WWDM.factors.Rd
mtk/man/setFactors-methods.Rd
mtk/man/mtkDefaultAnalyser-class.Rd
mtk/man/make.mtkParameterList.Rd
mtk/man/mtkMorrisDesigner.Rd
mtk/man/report-methods.Rd
mtk/man/mtkRegressionAnalyserResult.Rd
mtk/man/mtkWWDMEvaluatorResult-class.Rd
mtk/man/setState-methods.Rd
mtk/man/mtkFastAnalyserResult.Rd
mtk/man/getParameters-methods.Rd
mtk/man/getValue-methods.Rd
mtk/man/mtkNativeAnalyser.Rd
mtk/man/mtkFactor.Rd
mtk/man/getFactorFeatures-methods.Rd
mtk/man/mtkExpWorkflow-class.Rd
mtk/man/mtkParameter-class.Rd
mtk/man/mtkSobolAnalyserResult.Rd
mtk/man/Morris.Rd
mtk/man/setFeatures-methods.Rd
mtk/man/getDistributionName-methods.Rd
mtk/man/getDistributionParameters-methods.Rd
mtk/man/setProcess-methods.Rd
mtk/man/run-methods.Rd
mtk/man/mtkAnalyserResult-class.Rd
mtk/man/getNames-methods.Rd
mtk/man/mtkRandLHSDesignerResult.Rd
mtk/man/mtkFastDesigner.Rd
mtk/man/mtkLevels-class.Rd
mtk/man/setReady-methods.Rd
mtk/man/mtkMorrisDesignerResult.Rd
mtk/man/getDistributionNominalValueTypes-methods.Rd
mtk/man/mtkBasicMonteCarloDesigner-class.Rd
mtk/man/mtkProcess-class.Rd
mtk/man/Quantiles.Rd
mtk/man/mtkDesignerResult.Rd
mtk/man/mtkPLMMAnalyserResult-class.Rd
mtk/man/mtkBasicMonteCarloDesigner.Rd
mtk/man/mtkValue-class.Rd
mtk/man/getDiscreteDistributionWeights-methods.Rd
mtk/man/summary,mtkProcess-method.Rd
mtk/man/plot,mtkProcess-method.Rd
mtk/man/mtkRegressionAnalyserResult-class.Rd
mtk/man/mtkDesigner-class.Rd
mtk/man/mtkDefaultAnalyser.Rd
mtk/man/getDomainFactor-methods.Rd
mtk/man/mtkSobolDesigner.Rd
mtk/man/extractData-methods.Rd
mtk/man/mtkEvaluator-class.Rd
mtk/man/getNominalValueType-methods.Rd
mtk/man/mtkExpFactors.Rd
mtk/man/mtkRandLHSDesigner-class.Rd
mtk/man/mtkWWDMEvaluator-class.Rd
mtk/man/mtk.designerAddons.Rd
mtk/man/mtkMorrisDesignerResult-class.Rd
mtk/man/getData-methods.Rd
mtk/man/Ishigami.factors.Rd
mtk/man/mtk.evaluatorAddons.Rd
mtk/man/getNominalValue-methods.Rd
mtk/man/setWeights-methods.Rd
mtk/man/mtkBasicMonteCarloDesignerResult-class.Rd
mtk/man/make.mtkFactor.Rd
mtk/man/Fast.Rd
mtk/man/mtkMorrisAnalyserResult-class.Rd
mtk/man/mtkExpFactors-class.Rd
mtk/man/mtkNativeDesigner-class.Rd
mtk/man/mtkSobolDesigner-class.Rd
mtk/man/is.ready-methods.Rd
mtk/man/mtkFeature.Rd
mtk/man/getName-methods.Rd
mtk/man/mtkPLMMAnalyser-class.Rd
mtk/man/mtkEvaluator.Rd
mtk/man/mtkIshigamiEvaluator.Rd
mtk/man/mtkSobolAnalyserResult-class.Rd
mtk/man/mtkAnalyserResult.Rd
mtk/man/getFactorNames-methods.Rd
mtk/man/mtkNativeEvaluator-class.Rd
mtk/man/mtkMorrisAnalyser-class.Rd
mtk/man/mtkWWDMEvaluatorResult.Rd
mtk/man/mtkFastDesignerResult-class.Rd
mtk/man/mtkMorrisAnalyserResult.Rd
mtk/man/mtkSobolAnalyser.Rd
mtk/man/mtkNativeEvaluator.Rd
mtk/man/mtkSystemEvaluatorResult-class.Rd
mtk/man/make.mtkFeatureList.Rd
mtk/man/mtkSystemEvaluator.Rd
mtk/man/RandLHS.Rd
mtk/man/mtkFastDesigner-class.Rd
mtk/man/mtkNativeDesigner.Rd
mtk/man/mtkSystemEvaluator-class.Rd
mtk/man/mtkFastAnalyser.Rd
mtk/man/mtkDomain.Rd
mtk/man/mtkValue.Rd
mtk/man/Regression.Rd
mtk/man/deleteProcess-methods.Rd
mtk/man/PLMM.Rd
mtk/man/mtkMorrisDesigner-class.Rd
mtk/man/mtkDesigner.Rd
mtk/man/mtkPLMMAnalyser.Rd
mtk/man/mtk.analyserAddons.Rd
mtk/man/mtkRegressionAnalyser.Rd
mtk/man/Sobol.Rd
mtk/man/ANY.Rd
mtk/man/mtkFastAnalyserResult-class.Rd
mtk/man/setName-methods.Rd
mtk/man/getWeights-methods.Rd
mtk/man/setLevels-methods.Rd
mtk/man/mtkRandLHSDesigner.Rd
mtk/man/mtkParsor-class.Rd
mtk/man/mtkPLMMAnalyserResult.Rd
mtk/man/mtkAnalyser-class.Rd
mtk/man/Ishigami.Rd
mtk/man/setParameters-methods.Rd
mtk/man/mtkFastDesignerResult.Rd
mtk/man/getDistributionNominalValues-methods.Rd
mtk/man/mtkDesignerResult-class.Rd
mtk/man/mtkResult-class.Rd
mtk/man/mtk-package.Rd
mtk/man/mtkSobolDesignerResult.Rd
mtk/man/mtkBasicMonteCarloDesignerResult.Rd
mtk/man/mtkRegressionAnalyser-class.Rd
mtk/man/mtkMorrisAnalyser.Rd
mtk/man/mtkExperiment-class.Rd
mtk/man/mtkParsor.Rd
mtk/man/getProcess-methods.Rd
mtk/man/mtkAnalyser.Rd
mtk/man/mtkLevels.Rd
mtk/man/setXMLFilePath-methods.Rd
mtk/man/mtkProcess.Rd
mtk/man/getMTKFeatures-methods.Rd
mtk/man/mtkExpWorkflow.Rd
mtk/man/getDistributionNominalValueType-methods.Rd
mtk/man/mtkIshigamiEvaluator-class.Rd
mtk/man/setDistributionParameters-methods.Rd
mtk/man/setDomain-methods.Rd
mtk/man/WWDM.climates.Rd
mtk/man/setType-methods.Rd
mtk/man/mtkExperiment.Rd
mtk/man/mtkEvaluatorResult.Rd
mtk/man/mtkDomain-class.Rd