API for multiSA
Multi-Stock Assessment
| Global functions | |
|---|---|
| %*%,ad,matrix-method | Man page |
| .MSA | Source code |
| .calc_HSP | Source code |
| .calc_summary_F | Source code |
| .onLoad | Source code |
| .plot_resid_comp | Source code |
| .prof | Source code |
| .ret | Source code |
| AD | Man page |
| CondExpEq | Man page Source code |
| CondExpGe | Man page Source code |
| CondExpGt | Man page Source code |
| CondExpLe | Man page Source code |
| CondExpLt | Man page Source code |
| DCKMR-class | Man page |
| Dfishery-class | Man page |
| Dlabel-class | Man page |
| Dmodel-class | Man page |
| Dstock-class | Man page |
| Dsurvey-class | Man page |
| Dtag-class | Man page |
| MSAassess-class | Man page |
| MSAdata-class | Man page |
| Mohn_rho | Source code |
| SRalphaconv | Source code |
| SRbetaconv | Source code |
| SRhconv | Source code |
| SRkconv | Source code |
| alphaconv | Source code |
| barplot2 | Source code |
| betaconv | Source code |
| calc_Baranov | Source code |
| calc_F | Man page Source code |
| calc_HSP | Man page Source code |
| calc_LAK | Man page Source code |
| calc_NPR | Man page Source code |
| calc_POP | Man page Source code |
| calc_eqdist | Man page Source code |
| calc_fsel_age | Man page Source code |
| calc_growth | Man page Source code |
| calc_index | Man page Source code |
| calc_isel_age | Man page Source code |
| calc_nextN | Man page Source code |
| calc_phi_project | Man page Source code |
| calc_phi_simple | Man page Source code |
| calc_population | Man page Source code |
| calc_q | Source code |
| calc_recruitment | Man page Source code |
| calc_sel_len | Man page Source code |
| calc_selpar_penalty | Source code |
| calc_summary_F | Source code |
| check_DCKMR | Source code |
| check_Dfishery | Source code |
| check_Dlabel | Source code |
| check_Dmodel | Source code |
| check_Dstock | Source code |
| check_Dsurvey | Source code |
| check_Dtag | Source code |
| check_data | Man page Source code |
| check_det | Source code |
| check_parameters | Man page Source code |
| collapse_yearseason | Source code |
| conv_Sigma | Man page Source code |
| conv_mat | Source code |
| conv_mov | Man page Source code |
| conv_selpar | Man page Source code |
| conv_steepness | Source code |
| ddirmult_ | Source code |
| fit_MSA | Man page Source code |
| get_MSAdata | Man page Source code |
| get_likelihood_components | Source code |
| get_sdreport | Man page Source code |
| init_fn | Source code |
| like_CKMR | Man page Source code |
| like_comp | Man page Source code |
| logspace.add | Source code |
| make_color | Source code |
| make_map | Man page Source code |
| make_parameters | Man page Source code |
| make_rmd_CAA | Source code |
| make_rmd_CAL | Source code |
| make_rmd_SC | Source code |
| make_rmd_fishery | Source code |
| make_rmd_ind_stock | Source code |
| make_rmd_mov | Source code |
| make_rmd_ret_fleet | Source code |
| make_rmd_ret_stock | Source code |
| make_rmd_stock_region | Source code |
| make_rmd_survey | Source code |
| make_rmd_tagmov | Source code |
| make_tinyplot | Source code |
| make_unique_names | Source code |
| make_yearseason | Source code |
| matmul | Man page |
| matplot | Source code |
| message | Source code |
| message_info | Source code |
| message_oops | Source code |
| multiSA | Man page |
| multiSA-package | Man page |
| optimize_RTMB | Man page Source code |
| plot,MSAassess-method | Man page |
| plot-MSA-data | Man page |
| plot-MSA-state | Man page |
| plot.MSAprof | Man page |
| plot.MSAretro | Man page Source code |
| plot.default | Source code |
| plot_B | Man page Source code |
| plot_CAA | Man page Source code |
| plot_CAL | Man page Source code |
| plot_Ffleet | Man page Source code |
| plot_Fstock | Man page Source code |
| plot_IAA | Man page Source code |
| plot_IAL | Man page Source code |
| plot_N | Man page Source code |
| plot_R | Man page Source code |
| plot_Rdev | Man page Source code |
| plot_S | Man page Source code |
| plot_SC | Man page Source code |
| plot_SRR | Man page Source code |
| plot_V | Man page Source code |
| plot_catch | Man page Source code |
| plot_composition | Source code |
| plot_index | Man page Source code |
| plot_mov | Man page Source code |
| plot_recdist | Man page Source code |
| plot_resid_CAA | Source code |
| plot_resid_CAL | Source code |
| plot_resid_Cobs | Source code |
| plot_resid_IAA | Source code |
| plot_resid_IAL | Source code |
| plot_resid_Iobs | Source code |
| plot_resid_SC | Source code |
| plot_resid_tagmov | Source code |
| plot_self | Man page Source code |
| plot_seli | Man page Source code |
| plot_selstock | Man page Source code |
| plot_tagmov | Man page Source code |
| posfun | Man page Source code |
| prior | Man page |
| prior_M | Man page Source code |
| prior_R0x | Source code |
| prior_h | Man page Source code |
| prior_q | Man page Source code |
| prior_sel | Source code |
| profile | Man page |
| profile,MSAassess-method | Man page |
| profile.MSAassess | Man page |
| report | Man page |
| report,MSAassess-method | Man page |
| report.MSAassess | Man page |
| report.MSAretro | Man page Source code |
| resid_comp | Source code |
| residuals | Man page |
| residuals,MSAassess-method | Man page |
| retro_label | Source code |
| retrospective | Man page Source code |
| sapply2 | Man page Source code |
| sdconv | Source code |
| sdreport_int | Source code |
| show | Source code |
| simulate | Man page |
| simulate,MSAassess-method | Man page |
| simulate.MSAassess | Man page |
| softmax | Man page Source code |
| stop | Source code |
| summary | Man page |
| summary,MSAassess-method | Man page |
| summary.MSAretro | Man page Source code |
| update_report | Source code |
| warning | Source code |
