billing2016_suppfig4g: Mass spectrometry intensities by stem cell type

In multipanelfigure: Infrastructure to Assemble Multi-Panel Figures (from Grobs)

Mass spectrometry intensities by stem cell type

Description

This data was used to create Supplementary Figure 4g of Billing 2016 (see references).

Format

A matrix with 13 rows and 9 columns. Rows represent genes, columns represent experiments and are split by:

1. The type of stem cell experimented on. "ESC" means embryonic stem cell; "ESC-MSC" means mesenchymal stem cell derived from an embryonic stem cell; "BM-MSC" means mesenchymal stem cell derived from bone marrow.

2. The experimental replicate.

Values in the matrix are intensities of proteins coresponding to the genes, as measured by mass spectrometry.

Details

A matrix of log base 10 protein intensities as measured by mass spectrometry proteomics experiments on embryonic and mesenchymal stem cells.

References

Billing AM, Ben Hamidane H, Dib SS, et al. Comprehensive transcriptomic and proteomic characterization of human mesenchymal stem cells reveals source specific cellular markers. Scientific Reports. 2016;6:21507. doi:10.1038/srep21507.

Article text available at: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746666

Supplementary figures available at: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746666/bin/srep21507-s1.pdf

See Also

billing2016_suppfig4e

Examples

color_scale <- grDevices::cm.colors(25)
heatmap(
  billing2016_suppfig4g,
  margins = c(12, 5), col = color_scale,
  cexRow = 0.5, cexCol = 0.4)

multipanelfigure documentation built on May 29, 2024, 10:35 a.m.