Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) doi: 10.1371/journal.pone.0153844. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.
Maintainer: Derek Chiu email@example.com
Aline Talhouk firstname.lastname@example.org
Samuel Leung Samuel.Leung@vch.ca
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