API for ngstk
Next-Generation Sequencing (NGS) Data Analysis Toolkit
| Global functions | |
|---|---|
| .as_string | Source code |
| batch_file | Man page Source code |
| data_format_converter | Source code |
| default_handler_api | Source code |
| default_mhandler_api | Source code |
| format_filenames | Man page Source code |
| format_pp_meta_2_level | Source code |
| format_pp_meta_age | Man page Source code |
| format_pp_meta_fusions | Man page Source code |
| format_pp_meta_gender | Man page Source code |
| fusions2oncoprinter | Man page Source code |
| fusions2pp | Man page Source code |
| fusions2pp_meta | Man page Source code |
| fusions_filter | Man page Source code |
| fusions_filter_handler | Source code |
| fusions_filter_mhandler | Source code |
| get_config_value | Source code |
| get_files | Source code |
| get_files_ctime | Man page Source code |
| get_files_mtime | Man page Source code |
| get_pp_samplegroup | Man page Source code |
| get_split_seqs | Man page Source code |
| get_valid_col_index | Source code |
| handler | Source code |
| handler_default_value | Source code |
| handler_extract | Source code |
| handler_lower | Source code |
| handler_na_replace | Source code |
| handler_postfix | Source code |
| handler_prefix | Source code |
| handler_replace | Source code |
| handler_split | Source code |
| handler_upper | Source code |
| handler_value_map | Source code |
| initial_params | Source code |
| make_option | Man page Source code |
| merge_table_files | Man page Source code |
| mhandler | Source code |
| mhandler_fusions_any_match | Source code |
| mhandler_fusions_anyfull_match | Source code |
| mhandler_fusions_full_match | Source code |
| mhandler_fusions_left_match | Source code |
| mhandler_fusions_right_match | Source code |
| muts2mutation_mapper | Man page Source code |
| muts2oncoprinter | Man page Source code |
| muts2pp | Man page Source code |
| ngstk | Man page |
| ngstk-package | Man page |
| opt_parser | Man page Source code |
| par_download | Man page Source code |
| parse_args | Man page Source code |
| parse_args2 | Man page Source code |
| print_help | Man page Source code |
| rbin | Man page Source code |
| set_colors | Man page Source code |
| set_tools | Man page Source code |
| show_handlers | Man page Source code |
| show_mhandlers | Man page Source code |
| split_col_data | Man page Source code |
| split_list | Man page Source code |
| split_row_data | Man page Source code |
| split_row_file | Man page Source code |
| supress_any_message | Man page Source code |
| time_stamp | Man page Source code |
