get_methods_correlation_distance: Show the methods for calculating correlation or distance

In noisyr: Noise Quantification in High Throughput Sequencing Output

Description

This function outputs the methods available for the calculation of the correlation or distance. The standard correlation methods use stats::cor and a wide variety of distance methods are available using the philentropy package. To be used as input in calculate_expression_similarity_counts or calculate_expression_similarity_transcript.

Usage

get_methods_correlation_distance(names = TRUE)

Arguments

names

whether to output names (default) or characterisation as similarity or dissimilarity (used internally to invert dissimilarity measures)

Value

A character vector of options for the method arguement of the similarity calculation; if names=FALSE, a vector of types (similarity/dissimilarity measure) of the same length

Examples

get_methods_correlation_distance()

noisyr documentation built on April 16, 2021, 5:07 p.m.