as.nonmem2rx: Convert a model to a nonmem2rx model

In nonmem2rx: Converts 'NONMEM' Models to 'rxode2'

Convert a model to a nonmem2rx model

Description

Convert a model to a nonmem2rx model

Usage

as.nonmem2rx(model1, model2, compress = TRUE)

Arguments

model1	Input model 1
model2	Input model 2
compress	boolean to compress the ui at the end

Value

nonmem2rx model

Author(s)

Matthew L. Fidler

Examples

 mod <- nonmem2rx(system.file("mods/cpt/runODE032.ctl", package="nonmem2rx"),
                  determineError=FALSE, lst=".res", save=FALSE)

 mod2 <-function() {
   ini({
     lcl <- 1.37034036528946
     lvc <- 4.19814911033061
     lq <- 1.38003493562413
     lvp <- 3.87657341967489
     RSV <- c(0, 0.196446108190896, 1)
     eta.cl ~ 0.101251418415006
     eta.v ~ 0.0993872449483344
     eta.q ~ 0.101302674763154
     eta.v2 ~ 0.0730497519364148
   })
   model({
     cmt(CENTRAL)
     cmt(PERI)
     cl <- exp(lcl + eta.cl)
     v <- exp(lvc + eta.v)
     q <- exp(lq + eta.q)
     v2 <- exp(lvp + eta.v2)
     v1 <- v
     scale1 <- v
     k21 <- q/v2
     k12 <- q/v
     d/dt(CENTRAL) <- k21 * PERI - k12 * CENTRAL - cl * CENTRAL/v1
     d/dt(PERI) <- -k21 * PERI + k12 * CENTRAL
     f <- CENTRAL/scale1
     f ~ prop(RSV)
   })
 }

new <- try(as.nonmem2rx(mod2, mod))
if (!inherits(new, "try-error")) print(new, page=1)

nonmem2rx documentation built on April 3, 2025, 11:05 p.m.