dat_col_names_prime: Attribute(s) naming function.

In normfluodbf: Cleans and Normalizes FLUOstar DBF and DAT Files from 'Liposome' Flux Assays

Attribute(s) naming function.

Description

This function is used to name attribute(s). Attribute(s) names, in this case, are equivalent to the well labels found on the microplate reader. An attribute for a sample loaded into row A - column 1 will be named A1. In short, the function takes a clean data frame and returns attribute names that match the FLUOstar plate layout often presented as an Excel file.

Usage

dat_col_names_prime(
  dat = NULL,
  df,
  rows_used = NULL,
  cols_used = NULL,
  user_specific_labels = NULL
)

Arguments

dat	A string ("dat_1.dat") if the file is found within the present working directory (pwd) OR a path pointing directly to a ".dat" file.
df	A data frame that requires attribute labels.
rows_used	A character vector indicating the rows or tuples used on the microplate (usually a 96-well microplate). Initialized as NULL.
cols_used	A numeric vector indicating the plate columns or attributes used. Initialized as NULL.
user_specific_labels	A character vector where the user manually enters the used microplate wells based on the FLUOstar plate layout.

Value

Returns a character vector of attribute(s) names for the normalized data frame.

Author(s)

Tingwei Adeck

Examples

## Not run: 
fpath <- system.file("extdata", "dat_1.dat", package = "normfluodbf", mustWork = TRUE)
dat_df <- read.table(file=fpath)
nocomma_dat <- clean_odddat_optimus(dat_df)
resampled_scaled <- resample_dat_scale(nocomma_dat, tnp=3, cycles=40)
n = c('A','B','C')
sample_col_names <- dat_col_names_prime(dat = fpath, resampled_scaled, n)
## End(Not run)

normfluodbf documentation built on Sept. 28, 2024, 1:06 a.m.