ped1Alleles: ped1Alleles is a dataframe created by the geneDrop function

In nprcgenekeepr: Genetic Tools for Colony Management

ped1Alleles is a dataframe created by the geneDrop function

Description

ped1Alleles is a dataframe created by the geneDrop function

Usage

ped1Alleles

Format

A dataframe with 554 rows and 6 variables

V1

alleles assigned to the parents of the animals identified in the id column during iteration 1 of gene dropping performed by geneDrop.

V2

alleles assigned to the parents of the animals identified in the id column during iteration 1 of gene dropping performed by geneDrop.

V3

alleles assigned to the parents of the animals identified in the id column during iteration 1 of gene dropping performed by geneDrop.

V4

alleles assigned to the parents of the animals identified in the id column during iteration 1 of gene dropping performed by geneDrop.

id

character vector of animal IDs provided to the gene dropping function geneDrop.

parent

the parent type ("sire" or "dam") of the parent who supplied the alleles as assigned during each of the 4 gene dropping iterations performed by geneDrop.

Source

example baboon pedigree file provided by Deborah Newman, Southwest National Primate Center.

nprcgenekeepr documentation built on June 8, 2025, 10:55 a.m.