glean_gbif: Parse data from requests to GBIF
In ohvbd: One Health VBD Hub

glean_gbif

R Documentation

Parse data from requests to GBIF

Description

Extract the data returned by a call to fetch_gbif(), filter columns of interest, and find unique rows if required.

Usage

glean_gbif(res, cols = NULL, returnunique = FALSE)

Arguments

`res`	a list of responses from GBIF as an `ohvbd.responses` object.
`cols`	a character vector of columns to extract from the dataset.
`returnunique`	whether to return only the unique rows within each dataset according to the filtered columns.

Value

An ohvbd.data.frame containing the requested data.

Author(s)

Francis Windram

Examples


fetch_gbif("dbc4a3ae-680f-44e6-ab25-c70e27b38dbc") |>
  glean_gbif()

ohvbd.ids("dbc4a3ae-680f-44e6-ab25-c70e27b38dbc", "gbif") |>
  fetch() |>
  glean() # Calls glean_gbif()

ohvbd documentation built on March 10, 2026, 1:07 a.m.