plot-methods: Plot method

Description Usage Arguments Value

Description

Plot method

Usage

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## S4 method for signature 'trtSelOptThresh'
plot(x, y,
  main = "MCMC sample distribution of optimal threshold",
  col = "gray85", border.col = "darkgrey",
  xlab = "Optimal threshold estimate", yaxs = "i", freq = FALSE,
  breaks = seq(min(x@optThresh, na.rm = TRUE), max(x@optThresh, na.rm =
  TRUE), length.out = 20), ...)

## S4 method for signature 'diagOptThresh'
plot(x, y,
  main = "MCMC sample distribution of optimal threshold",
  col = "gray85", border.col = "darkgrey",
  xlab = "Optimal threshold estimate", yaxs = "i", freq = FALSE,
  breaks = seq(min(x@optThresh, na.rm = TRUE), max(x@optThresh, na.rm =
  TRUE), length.out = 20), ...)

Arguments

x

a trtSelOptThresh or a diagOptThresh object.

y

unused parameter.

main

an overall title for the plot.

col

the color of the histogram.

border.col

the color of the histogram border.

xlab

a label for the x axis of the plot.

yaxs

The style of axis interval calculation to be used for the y-axis.

freq

logical; if TRUE, the histogram graphic is a representation of frequencies; if FALSE, probability densities are plotted (so that the histogram has a total area of one).

breaks

one of:

  • a vector giving the breakpoints between histogram cells,

  • a function to compute the vector of breakpoints,

  • a single number giving the number of cells for the histogram,

  • a character string naming an algorithm to compute the number of cells,

  • a function to compute the number of cells.

In the last three cases the number is a suggestion only; as the breakpoints will be set to pretty values, the number is limited to 1e6 (with a warning if it was larger). If breaks is a function, the x vector is supplied to it as the only argument (and the number of breaks is only limited by the amount of available memory).

...

other graphical parameters.

Value

None


optimalThreshold documentation built on Jan. 13, 2020, 5:06 p.m.