oro.dicom: Rigorous - DICOM Input / Output

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Data input/output functions for data that conform to the Digital Imaging and Communications in Medicine (DICOM) standard, part of the Rigorous Analytics bundle.

Author
Brandon Whitcher [aut, cre]
Date of publication
2015-04-20 11:51:37
Maintainer
Brandon Whitcher <bwhitcher@gmail.com>
License
BSD_3_clause + file LICENSE
Version
0.5.0
URLs

View on CRAN

Man pages

create3D
Create Arrays from DICOM Headers/Images
dec2base
Convert Decimal to Base N Number in String
dicom2analyze
Convert DICOM Header to Analyze
dicom2nifti
Convert DICOM Header to NIfTI
dicom.dic
Lookup Tables for DICOM Header Information
dicomTable
Construct Data Frame from DICOM Headers
extractHeader
Extract Single Field from DICOM Headers
getOrientation
Convert Direction Cosines to Anatomical Direction
header2matrix
Converts DICOM Header Field to a Matrix
is.axial
Orthogonal Planes
matchHeader
Match String to DICOM Header Field
nextHeader
Check String Against DICOM Header Field to Produce Error...
parsePixelData
Parse DICOM Pixel or Spectroscopy Data
readDICOM
Read All DICOM Files in a Directory
readDICOMFile
Read Single DICOM File
str2time
Convert DICOM Time/Date Entry
swapDimension
Reslice Data Volume Using DICOM Header Fields
writeHeader
Write DICOM Table to ASCII File

Files in this package

oro.dicom
oro.dicom/inst
oro.dicom/inst/CITATION
oro.dicom/inst/jpeg
oro.dicom/inst/jpeg/cervicalKyphosis.dcm
oro.dicom/inst/sphere3
oro.dicom/inst/sphere3/sphere3.02.dcm
oro.dicom/inst/sphere3/sphere3.28.dcm
oro.dicom/inst/sphere3/sphere3.14.dcm
oro.dicom/inst/sphere3/sphere3.18.dcm
oro.dicom/inst/sphere3/sphere3.20.dcm
oro.dicom/inst/sphere3/sphere3.08.dcm
oro.dicom/inst/sphere3/sphere3.00.dcm
oro.dicom/inst/sphere3/sphere3.19.dcm
oro.dicom/inst/sphere3/sphere3.21.dcm
oro.dicom/inst/sphere3/sphere3.13.dcm
oro.dicom/inst/sphere3/sphere3.04.dcm
oro.dicom/inst/sphere3/sphere3.23.dcm
oro.dicom/inst/sphere3/sphere3.22.dcm
oro.dicom/inst/sphere3/sphere3.29.dcm
oro.dicom/inst/sphere3/sphere3.11.dcm
oro.dicom/inst/sphere3/sphere3.10.dcm
oro.dicom/inst/sphere3/sphere3.01.dcm
oro.dicom/inst/sphere3/sphere3.09.dcm
oro.dicom/inst/sphere3/sphere3.31.dcm
oro.dicom/inst/sphere3/sphere3.12.dcm
oro.dicom/inst/sphere3/sphere3.05.dcm
oro.dicom/inst/sphere3/sphere3.30.dcm
oro.dicom/inst/sphere3/sphere3.25.dcm
oro.dicom/inst/sphere3/sphere3.16.dcm
oro.dicom/inst/sphere3/sphere3.24.dcm
oro.dicom/inst/sphere3/sphere3.03.dcm
oro.dicom/inst/sphere3/sphere3.26.dcm
oro.dicom/inst/sphere3/sphere3.15.dcm
oro.dicom/inst/sphere3/sphere3.07.dcm
oro.dicom/inst/sphere3/sphere3.27.dcm
oro.dicom/inst/sphere3/sphere3.17.dcm
oro.dicom/inst/sphere3/sphere3.06.dcm
oro.dicom/inst/doc
oro.dicom/inst/doc/dicom.R
oro.dicom/inst/doc/dicom.pdf
oro.dicom/inst/doc/dicom.Rnw
oro.dicom/inst/dcm
oro.dicom/inst/dcm/Abdo.dcm
oro.dicom/inst/dcm/Spine1.dcm
oro.dicom/inst/dcm/MR-sonata-3D-as-Tile.dcm
oro.dicom/inst/hk-40
oro.dicom/inst/hk-40/hk40.RData
oro.dicom/tests
oro.dicom/tests/Examples
oro.dicom/tests/Examples/oro.dicom-Ex.Rout.save
oro.dicom/tests/testthat.R
oro.dicom/tests/testthat
oro.dicom/tests/testthat/test_convert.R
oro.dicom/tests/testthat/test_readDICOM.R
oro.dicom/tests/testthat/test_header.R
oro.dicom/tests/testthat/test_orientation.R
oro.dicom/NAMESPACE
oro.dicom/data
oro.dicom/data/dicom.VR.rda
oro.dicom/data/dicom.dic.rda
oro.dicom/data/dicom.dic.csv.xz
oro.dicom/data/dicom.VR.csv.gz
oro.dicom/data/dicom.dic.thompson.csv.bz2
oro.dicom/R
oro.dicom/R/convert.R
oro.dicom/R/recursive.R
oro.dicom/R/dicom.R
oro.dicom/R/header.R
oro.dicom/R/create.R
oro.dicom/R/dicom2nifti.R
oro.dicom/R/dec2base.R
oro.dicom/R/oro.dicom-package.R
oro.dicom/R/orientation.R
oro.dicom/R/zzz.R
oro.dicom/vignettes
oro.dicom/vignettes/dicom.bib
oro.dicom/vignettes/dicom.Rnw
oro.dicom/MD5
oro.dicom/build
oro.dicom/build/vignette.rds
oro.dicom/DESCRIPTION
oro.dicom/man
oro.dicom/man/readDICOM.Rd
oro.dicom/man/dec2base.Rd
oro.dicom/man/readDICOMFile.Rd
oro.dicom/man/create3D.Rd
oro.dicom/man/matchHeader.Rd
oro.dicom/man/writeHeader.Rd
oro.dicom/man/dicomTable.Rd
oro.dicom/man/dicom2analyze.Rd
oro.dicom/man/swapDimension.Rd
oro.dicom/man/header2matrix.Rd
oro.dicom/man/parsePixelData.Rd
oro.dicom/man/nextHeader.Rd
oro.dicom/man/extractHeader.Rd
oro.dicom/man/dicom2nifti.Rd
oro.dicom/man/getOrientation.Rd
oro.dicom/man/dicom.dic.Rd
oro.dicom/man/str2time.Rd
oro.dicom/man/is.axial.Rd
oro.dicom/LICENSE