API for osmose
Object Oriented Simulator of Marine Ecosystems
| Global functions | |
|---|---|
| .bySpecies | Source code |
| .check_species | Source code |
| .compareVersion | Source code |
| .compute_average_matrix | Source code |
| .countOnes | Source code |
| .createCalibrationList | Source code |
| .createParameterList | Source code |
| .errorReadingOutputs | Source code |
| .extract_species_from_list | Source code |
| .getBoolean | Source code |
| .getConfig | Source code |
| .getConfig.character | Source code |
| .getConfig.list | Source code |
| .getConfig.osmose.config | Source code |
| .getFileAsVector | Source code |
| .getKey | Source code |
| .getModelName | Source code |
| .getPar | Source code |
| .getSpecies | Source code |
| .getValues | Source code |
| .getVersion | Source code |
| .guessSeparator | Source code |
| .guessType | Source code |
| .listTree | Source code |
| .makeTree | Source code |
| .niceSeq | Source code |
| .osmose.barplot | Man page Source code |
| .osmose.format_data_stacked | Man page Source code |
| .plot_osmose_dietMatrix | Man page |
| .readFilesList | Source code |
| .readInputCsv | Source code |
| .readMortalityCsv | Source code |
| .readOsmoseConfiguration | Source code |
| .readOsmoseCsv | Source code |
| .read_1D | Source code |
| .read_2D | Man page Source code |
| .read_MortStage | Source code |
| .read_osmose_ncdf | Man page Source code |
| .removeZeros | Source code |
| .reshapeOsmoseTable | Source code |
| .rewriteOutputs | Source code |
| .strsplit2v | Source code |
| .summary.generic | Source code |
| .warningReadingOutputs | Source code |
| addAttr | Source code |
| cacheManager | Man page Source code |
| cachePath | Source code |
| configureCalibration | Man page Source code |
| flushCache | Source code |
| getPredationData | Source code |
| getReproductionData | Source code |
| getSpeciesData | Source code |
| getVar | Man page Source code |
| getWhats | Source code |
| get_var | Man page Source code |
| get_var.osmose | Man page Source code |
| get_var.osmose.config | Man page Source code |
| getmfrow | Source code |
| osmose | Man page |
| osmose-package | Man page |
| osmose.stackedpcent | Source code |
| osmose2R | Man page Source code |
| osmose2R.v3r0 | Source code |
| osmose2R.v3r1 | Source code |
| osmosePlots2D | Source code |
| osmose_demo | Man page Source code |
| plot.osmose | Man page Source code |
| plot.osmose.abundance | Man page Source code |
| plot.osmose.abundanceByAge | Man page Source code |
| plot.osmose.abundanceBySize | Man page Source code |
| plot.osmose.abundanceByTL | Man page Source code |
| plot.osmose.biomass | Man page Source code |
| plot.osmose.biomassByAge | Man page Source code |
| plot.osmose.biomassBySize | Man page Source code |
| plot.osmose.biomassByTL | Man page Source code |
| plot.osmose.config | Man page Source code |
| plot.osmose.config.predation | Man page Source code |
| plot.osmose.config.reproduction | Man page Source code |
| plot.osmose.config.species | Man page Source code |
| plot.osmose.yield | Man page Source code |
| plot.osmose.yieldByAge | Man page Source code |
| plot.osmose.yieldBySize | Man page Source code |
| plot.osmose.yieldN | Man page Source code |
| plot.osmose.yieldNByAge | Man page Source code |
| plot.osmose.yieldNBySize | Man page Source code |
| plot2DTsType1 | Source code |
| plotGrowthType1 | Source code |
| plotReproductionType1 | Source code |
| plotReproductionType2 | Source code |
| print.osmose | Man page Source code |
| print.summary.osmose | Man page Source code |
| process.dietMatrix | Source code |
| process.mortalityRate | Source code |
| readOsmoseConfiguration | Man page Source code |
| readOsmoseFiles | Man page Source code |
| read_osmose | Man page Source code |
| report | Man page Source code |
| report.osmose | Man page Source code |
| runOsmose | Man page Source code |
| run_osmose | Man page Source code |
| summary.osmose | Man page Source code |
| summary.osmose.biomass | Source code |
| summary.osmose.dietMatrix | Man page Source code |
| summary.osmose.meanTL | Source code |
| summary.osmose.meanTLCatch | Source code |
| summary.osmose.mortalityRate | Man page Source code |
| updateCache | Man page Source code |
| viewDataList | Source code |
| write.osmose | Man page Source code |
| writeOsmoseParameters | Source code |
| write_osmose | Man page Source code |
