bind_to_function | Encloses argument in a function's environment |
create_config | Set and check parameter settings of outbreaker |
create_param | Initializes outputs for outbreaker |
custom_likelihoods | Customise likelihood functions for outbreaker |
custom_moves | Customise samplers for outbreaker |
custom_priors | Customise priors for outbreaker |
fake_outbreak | Small simulated outbreak |
get_cpp_api | Access internal C++ rountines used in outbreaker2 |
outbreaker | outbreaker2: main function for reconstructing disease... |
outbreaker_chains | Basic methods for processing outbreaker results |
outbreaker_data | Process input data for outbreaker |
outbreaker_package | outbreaker2: a platform for disease outbreak reconstruction |
palettes | Color palettes used in outbreaker |
sim_ctd | Simulate contact data from a transmission tree |
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