Context | R Documentation |
This class represents the base context for interacting with
Backend
implementations via the BackendService
interface.
This class is a vanilla wrapper around a Backend
implementation.
It registers a backend instance and forwards all BackendService
methods calls to the backend instance. Subclasses can override any of the
BackendService
methods to decorate the backend instance with
additional functionality (e.g., see the ProgressTrackingContext
class for an example).
parabar::BackendService
-> Context
backend
The Backend
object registered with the
context.
new()
Create a new Context
object.
Context$new()
An object of class Context
.
set_backend()
Set the backend instance to be used by the context.
Context$set_backend(backend)
backend
An object of class Backend
that
implements the BackendService
interface.
start()
Start the backend.
Context$start(specification)
specification
An object of class Specification
that contains the backend configuration.
This method returns void. The resulting backend must be stored in the
.cluster
private field on the Backend
abstract class,
and accessible to any concrete backend implementations via the active
binding cluster
.
stop()
Stop the backend.
Context$stop()
This method returns void.
clear()
Remove all objects from the backend. This function is equivalent to
calling rm(list = ls(all.names = TRUE))
on each node in the
backend.
Context$clear()
This method returns void.
peek()
Inspect the backend for variables available in the .GlobalEnv
.
Context$peek()
This method returns a list of character vectors, where each element
corresponds to a node in the backend. The character vectors contain
the names of the variables available in the .GlobalEnv
on each
node.
export()
Export variables from a given environment to the backend.
Context$export(variables, environment)
variables
A character vector of variable names to export.
environment
An environment object from which to export the variables. Defaults to the parent frame.
This method returns void.
evaluate()
Evaluate an arbitrary expression on the backend.
Context$evaluate(expression)
expression
An unquoted expression to evaluate on the backend.
This method returns the result of the expression evaluation.
sapply()
Run a task on the backend akin to parallel::parSapply()
.
Context$sapply(x, fun, ...)
x
An atomic vector or list to pass to the fun
function.
fun
A function to apply to each element of x
.
...
Additional arguments to pass to the fun
function.
This method returns void. The output of the task execution must be
stored in the private field .output
on the Backend
abstract class, and is accessible via the get_output()
method.
lapply()
Run a task on the backend akin to parallel::parLapply()
.
Context$lapply(x, fun, ...)
x
An atomic vector or list to pass to the fun
function.
fun
A function to apply to each element of x
.
...
Additional arguments to pass to the fun
function.
This method returns void. The output of the task execution must be
stored in the private field .output
on the Backend
abstract class, and is accessible via the get_output()
method.
apply()
Run a task on the backend akin to parallel::parApply()
.
Context$apply(x, margin, fun, ...)
x
An array to pass to the fun
function.
margin
A numeric vector indicating the dimensions of x
the
fun
function should be applied over. For example, for a matrix,
margin = 1
indicates applying fun
rows-wise, margin = 2
indicates applying fun
columns-wise, and margin = c(1, 2)
indicates applying fun
element-wise. Named dimensions are also
possible depending on x
. See parallel::parApply()
and
base::apply()
for more details.
fun
A function to apply to x
according to the margin
.
...
Additional arguments to pass to the fun
function.
This method returns void. The output of the task execution must be
stored in the private field .output
on the Backend
abstract class, and is accessible via the get_output()
method.
get_output()
Get the output of the task execution.
Context$get_output(...)
...
Additional arguments to pass to the backend registered
with the context. This is useful for backends that require additional
arguments to fetch the output (e.g., AsyncBackend$get_output(wait = TRUE)
).
This method fetches the output of the task execution after calling
the sapply()
method. It returns the output and immediately removes
it from the backend. Therefore, subsequent calls to this method are
not advised. This method should be called after the execution of a
task.
A vector, matrix, or list of the same length as x
, containing the
results of the fun
. The output format differs based on the specific
operation employed. Check out the documentation for the apply
operations of parallel::parallel
for more information.
clone()
The objects of this class are cloneable with this method.
Context$clone(deep = FALSE)
deep
Whether to make a deep clone.
ProgressTrackingContext
, BackendService
,
Backend
, and SyncBackend
.
# Define a task to run in parallel.
task <- function(x, y) {
# Sleep a bit.
Sys.sleep(0.25)
# Return the result of a computation.
return(x + y)
}
# Create a specification object.
specification <- Specification$new()
# Set the number of cores.
specification$set_cores(cores = 2)
# Set the cluster type.
specification$set_type(type = "psock")
# Create a backend factory.
backend_factory <- BackendFactory$new()
# Get a synchronous backend instance.
backend <- backend_factory$get("sync")
# Create a base context object.
context <- Context$new()
# Register the backend with the context.
context$set_backend(backend)
# From now all, all backend operations are intercepted by the context.
# Start the backend.
context$start(specification)
# Run a task in parallel (i.e., approx. 1.25 seconds).
context$sapply(x = 1:10, fun = task, y = 10)
# Get the task output.
context$get_output()
# Close the backend.
context$stop()
# Get an asynchronous backend instance.
backend <- backend_factory$get("async")
# Register the backend with the same context object.
context$set_backend(backend)
# Start the backend reusing the specification object.
context$start(specification)
# Run a task in parallel (i.e., approx. 1.25 seconds).
context$sapply(x = 1:10, fun = task, y = 10)
# Get the task output.
backend$get_output(wait = TRUE)
# Close the backend.
context$stop()
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