API for parafac4microbiome
Parallel Factor Analysis Modelling of Longitudinal Microbiome Data

Global functions
%>% Man page
Fujita2023 Man page
Shao2019 Man page
assessModelQuality Man page Source code
assessModelStability Man page Source code
calcVarExpPerComponent Man page Source code
calculateFMS Man page Source code
calculateSparsity Man page Source code
calculateVarExp Man page Source code
corcondia Man page Source code
fac_to_vect Man page Source code
flipLoadings Man page Source code
ignore_unused_imports Source code
importMicrobiotaProcess Man page Source code
importPhyloseq Man page Source code
importTreeSummarizedExperiment Man page Source code
initializePARAFAC Man page Source code
multiwayCLR Man page Source code
multiwayCenter Man page Source code
multiwayScale Man page Source code
parafac Man page Source code
parafac4microbiome Man page
parafac4microbiome-package Man page
parafac_core_als Man page Source code
parafac_fun Man page Source code
parafac_gradient Man page Source code
plotModelMetric Man page Source code
plotModelStability Man page Source code
plotModelTCCs Man page Source code
plotPARAFACmodel Man page Source code
processDataCube Man page Source code
reinflateFac Man page Source code
reinflateTensor Man page Source code
reshapeData Man page Source code
sortComponents Man page Source code
transformPARAFACloadings Man page Source code
vanderPloeg2024 Man page
vect_to_fac Man page Source code
parafac4microbiome documentation built on June 8, 2025, 11:40 a.m.