vanderPloeg2024: vanderPloeg2024 longitudinal dataset

In parafac4microbiome: Parallel Factor Analysis Modelling of Longitudinal Microbiome Data

vanderPloeg2024 longitudinal dataset

Description

The vanderPloeg2024 longitudinal data containing six oral microbiome niches, as well as salivary metabolomics.

Usage

vanderPloeg2024

Format

vanderPloeg2024

Each measured dataset contains three elements:

data

Array object of the data cube

mode1

Dataframe with all the subject metadata, ordered the same as the rows in the data cube.

mode2

Taxonomic classification of the microbiota, ordered the same as the columns in the data cube.

mode3

Dataframe with the time metadata, ordered the same as the third dimension in the array.

...

Source

\Sexpr[results=rd]{tools:::Rd_expr_doi("10.1101/2024.03.18.585469")}

parafac4microbiome documentation built on June 8, 2025, 11:40 a.m.